Gene
RNA
| Item | Value |
|---|---|
| gene id | G740681 |
| gene name | LOC106599727 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 69431270 ~ 69431484 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: PH domain leucine-rich repeat-containing protein phosphatase 1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU840961 | True | 215 | lncRNA | 0.65 | 1 | 69431270 | 69431484 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110530970 | LOC106569164 | coding | downstream | 198276 | 69114482 ~ 69240965 (-) |
| igfbp1 | igfbp1 | coding | downstream | 273711 | 69150343 ~ 69157726 (-) |
| LOC110530426 | LOC106569167 | coding | downstream | 436010 | 68908995 ~ 68995260 (-) |
| LOC110530425 | tbb2a | coding | downstream | 523082 | 68901719 ~ 68908188 (-) |
| LOC110530423 | LOC106569170 | coding | downstream | 575236 | 68834340 ~ 68856034 (-) |
| si:ch73-40a17.3 | mep1b | coding | upstream | 3058 | 69434542 ~ 69450423 (-) |
| LOC118965618 | rnf138 | coding | upstream | 30436 | 69461920 ~ 69474389 (-) |
| LOC110530436 | rnf138 | coding | upstream | 45822 | 69477306 ~ 69487134 (-) |
| LOC110530438 | ripk1 | coding | upstream | 105684 | 69537168 ~ 69553690 (-) |
| LOC110530443 | LOC106569150 | coding | upstream | 625019 | 70056503 ~ 70095135 (-) |
| G740718 | LOC106569160 | non-coding | downstream | 751 | 69408968 ~ 69430653 (-) |
| G740711 | NA | non-coding | downstream | 34258 | 69396618 ~ 69397012 (-) |
| G740710 | NA | non-coding | downstream | 37571 | 69393499 ~ 69393699 (-) |
| G740708 | NA | non-coding | downstream | 38805 | 69392248 ~ 69392465 (-) |
| G740698 | NA | non-coding | downstream | 56234 | 69374683 ~ 69375036 (-) |
| G740816 | NA | non-coding | upstream | 91905 | 69523389 ~ 69523687 (-) |
| G740817 | NA | non-coding | upstream | 92741 | 69524225 ~ 69524461 (-) |
| G740963 | NA | non-coding | upstream | 126267 | 69557751 ~ 69557980 (-) |
| G741021 | NA | non-coding | upstream | 220357 | 69651841 ~ 69661122 (-) |
| G741071 | NA | non-coding | upstream | 289005 | 69720489 ~ 69720841 (-) |
| G738504 | LOC106569192 | other | downstream | 2005931 | 67423863 ~ 67425339 (-) |
| G738502 | LOC106569192 | other | downstream | 2010214 | 67420739 ~ 67421056 (-) |
| G738472 | LOC106569192 | other | downstream | 2049293 | 67381220 ~ 67381977 (-) |
| G741077 | foxc1 | other | upstream | 294290 | 69725774 ~ 69727431 (-) |
| G741177 | NA | other | upstream | 350805 | 69782289 ~ 69783294 (-) |
| LOC110530971 | NA | other | upstream | 720323 | 70148848 ~ 70160838 (-) |
| LOC110530449 | NA | other | upstream | 767427 | 70198887 ~ 70200278 (-) |
| G742038 | NA | other | upstream | 1087903 | 70519387 ~ 70525951 (-) |
