G741178


Basic Information

Item Value
gene id G741178
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 69784452 ~ 69785235 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU841505
cttagcaaatttattgaaaatgaaaaacagaaatatctcgTTTAcatagtattcacacccttgagtcaatacatgtcagtATCAAtactggcagtgattacagctgtgagtctttctgggtaagtctctaagagctttgcacacgtGAATTGCACAATATCGGTACATTATTCTTCAAAGAATTCTTCAAGCTccatcaagttggttgttgatcattgctagacagctattttcaagtcctgccatagattttcaaaccgatttaattcaaaactgtaactaggccacccaggaacattttatgtcttcttggtaagcaactccagtgtatatttggccttgtgttttagattattgtcctgctgaaaggtgaatttgtctcccagtgtctgttggaaagcagacaaacatgtttcctttaggattttgcctgtgcttagctctattccatttctttttatcataaaaagtgagtccatgcaaattCTGCGTCATGTTcagcaaatttttactcctgaacttatttaggctagccataacacagtggttgaatacttattgactcaagacatttcagcttttcatgtttaattaatttgcaaaaaattctctatacaaaattccactttgacattatggggaattgtgtgtaggccGATGAAATCTAAATGCAATaaatttaaattcaggctgtagcacaactaaatttggaaaaagtcaaggggtgtgaatactttctgaaggccctgtaggaGGTGGGCCAGATAATTGCTCCATTTGGCCC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU841505 True 784 lncRNA 0.37 1 69784452 69785235

Neighbor

gene id symbol gene type direction distance location
LOC110530438 ripk1 coding downstream 230762 69537168 ~ 69553690 (-)
LOC110530436 rnf138 coding downstream 297318 69477306 ~ 69487134 (-)
LOC118965618 rnf138 coding downstream 310063 69461920 ~ 69474389 (-)
si:ch73-40a17.3 mep1b coding downstream 334029 69434542 ~ 69450423 (-)
LOC110530970 LOC106569164 coding downstream 551458 69114482 ~ 69240965 (-)
LOC110530443 LOC106569150 coding upstream 271268 70056503 ~ 70095135 (-)
LOC110530971 NA coding upstream 363613 70148848 ~ 70160838 (-)
LOC110530448 NA coding upstream 378779 70164014 ~ 70173178 (-)
gpaa1 gpaa1 coding upstream 401234 70186469 ~ 70198565 (-)
LOC110530449 NA coding upstream 413652 70198887 ~ 70200278 (-)
G741071 NA non-coding downstream 63611 69720489 ~ 69720841 (-)
G741021 NA non-coding downstream 123330 69651841 ~ 69661122 (-)
G740963 NA non-coding downstream 226472 69557751 ~ 69557980 (-)
G740817 NA non-coding downstream 259991 69524225 ~ 69524461 (-)
G740816 NA non-coding downstream 260765 69523389 ~ 69523687 (-)
G741195 LOC100136012 non-coding upstream 26546 69811781 ~ 69812052 (-)
G741211 NA non-coding upstream 59523 69844758 ~ 69845031 (-)
G741212 NA non-coding upstream 60349 69845584 ~ 69845813 (-)
G741365 NA non-coding upstream 212429 69997664 ~ 69997928 (-)
G741366 NA non-coding upstream 213181 69998416 ~ 69998763 (-)
G741177 NA other downstream 1158 69782289 ~ 69783294 (-)
G741077 foxc1 other downstream 57021 69725774 ~ 69727431 (-)
G740718 LOC106569160 other downstream 353799 69408968 ~ 69430653 (-)
igfbp1 igfbp1 other downstream 626726 69150343 ~ 69157726 (-)
G738504 LOC106569192 other downstream 2359113 67423863 ~ 67425339 (-)
G742038 NA other upstream 734152 70519387 ~ 70525951 (-)
G742383 LOC106569128 other upstream 1050123 70835358 ~ 70842457 (-)
G743076 NA other upstream 1285399 71070634 ~ 71071082 (-)

Expression


Co-expression Network