Gene
RNA
| Item | Value |
|---|---|
| gene id | G741212 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 69845584 ~ 69845813 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU841539 | True | 230 | lncRNA | 0.34 | 1 | 69845584 | 69845813 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110530438 | ripk1 | coding | downstream | 291894 | 69537168 ~ 69553690 (-) |
| LOC110530436 | rnf138 | coding | downstream | 358450 | 69477306 ~ 69487134 (-) |
| LOC118965618 | rnf138 | coding | downstream | 371195 | 69461920 ~ 69474389 (-) |
| si:ch73-40a17.3 | mep1b | coding | downstream | 395161 | 69434542 ~ 69450423 (-) |
| LOC110530970 | LOC106569164 | coding | downstream | 612590 | 69114482 ~ 69240965 (-) |
| LOC110530443 | LOC106569150 | coding | upstream | 210690 | 70056503 ~ 70095135 (-) |
| LOC110530971 | NA | coding | upstream | 303035 | 70148848 ~ 70160838 (-) |
| LOC110530448 | NA | coding | upstream | 318201 | 70164014 ~ 70173178 (-) |
| gpaa1 | gpaa1 | coding | upstream | 340656 | 70186469 ~ 70198565 (-) |
| LOC110530449 | NA | coding | upstream | 353074 | 70198887 ~ 70200278 (-) |
| G741211 | NA | non-coding | downstream | 553 | 69844758 ~ 69845031 (-) |
| G741195 | LOC100136012 | non-coding | downstream | 33532 | 69811781 ~ 69812052 (-) |
| G741178 | NA | non-coding | downstream | 60349 | 69784452 ~ 69785235 (-) |
| G741071 | NA | non-coding | downstream | 124743 | 69720489 ~ 69720841 (-) |
| G741021 | NA | non-coding | downstream | 184462 | 69651841 ~ 69661122 (-) |
| G741365 | NA | non-coding | upstream | 151851 | 69997664 ~ 69997928 (-) |
| G741366 | NA | non-coding | upstream | 152603 | 69998416 ~ 69998763 (-) |
| G741368 | NA | non-coding | upstream | 153604 | 69999417 ~ 69999865 (-) |
| G741393 | NA | non-coding | upstream | 179708 | 70025521 ~ 70026115 (-) |
| G741400 | NA | non-coding | upstream | 188394 | 70034207 ~ 70034435 (-) |
| G741177 | NA | other | downstream | 62290 | 69782289 ~ 69783294 (-) |
| G741077 | foxc1 | other | downstream | 118153 | 69725774 ~ 69727431 (-) |
| G740718 | LOC106569160 | other | downstream | 414931 | 69408968 ~ 69430653 (-) |
| igfbp1 | igfbp1 | other | downstream | 687858 | 69150343 ~ 69157726 (-) |
| G738504 | LOC106569192 | other | downstream | 2420245 | 67423863 ~ 67425339 (-) |
| G742038 | NA | other | upstream | 673574 | 70519387 ~ 70525951 (-) |
| G742383 | LOC106569128 | other | upstream | 989545 | 70835358 ~ 70842457 (-) |
| G743076 | NA | other | upstream | 1224821 | 71070634 ~ 71071082 (-) |
