XLOC_026731


Basic Information

Item Value
gene id XLOC_026731
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 47130032 ~ 47131111 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00053104
GGTTTCTGGCCGTCTCTCAGCGCGCAGGAACGGGCTCGCAGCAGCAGGGCGCTCGGGTTACTTTCAAGTGTTCAGTTTCCACCCTTCAAACGCTTCCAGAACGGTCTGTCAAAGGCAAACGGCGCGTAAAACACTCGCTGACTGACAGAAGACGCGCATGTGTTGTAATACGTGCTGTGATCAGAGGATCAATCATTCGTAAAGTCACAAAACAAAACTTCTCGCTATCATCCGGTCAGGCGACATCCGACCTCCACCGGTGACGCGAGTCCCGCCTCCTGTCAACCGACAACGTGATATCTGATTGGTCCAAGGGAGCGCTTCCTGGTGTGTTCTGCGTTTTGATCGGCTTTCGGCCTCCAACGGCGGAAGAGTGCTATTGGACGGCTTGGACGTCAATTTAATTTCAATAAGAAAAGAATAGGAAAATACGGATGTTGTTGCAAAGTTAATCAAATGTACTTACTTGATCACAACATATGTAACCATGAGAAATTACGATAATGTggtgtttatataatttatataggctaataaaataaatatagaaaaagataaacaaaccatgatattttaatagtaattataacataatattcaacataatattcattcattttcttttcggcttagtccgtttattaatatGGCGTCGCCACAccggaaagaaccaccaacttaaccagcacatgtttaaatttttttcttatttattttttacagtcatttgtTTAAACCCATGACTGGGTGACACTCATACACATTCAGGGGACGATATAAGGGCCCATGCCATTTTGGGGCCTGTAAAAGAACTATTAGGGACCCAAGAGCATTTCGCAACCACACTTTTGtgcaacaaaaaaagtaaatttttttaaagaaatataactAAAAGAAGGATAACGAGGAAgtacaagagaaaaaaataaataaataaatgagggcatatgaaaaaataaaacaaagtaatgctgaatattaaataaagttttgATTGCTTTCTTGTTATGAGACTTTGTGATGGTTTTTAAGTACAGTTCCAATtctcatttatataaataaaacattttggctCACTTT

Function

GO:

id name namespace
GO:0019371 cyclooxygenase pathway biological_process
GO:0004666 prostaglandin-endoperoxide synthase activity molecular_function

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00053104 True 1080 lncRNA 0.38 1 47130032 47131111

Neighbor

gene id symbol gene type direction distance location
XLOC_026730 qtrt1 coding downstream 1936 47114328 ~ 47128096 (-)
XLOC_026729 CR392045.1 coding downstream 24765 46919522 ~ 47105267 (-)
XLOC_026728 elavl3 coding downstream 312031 46800190 ~ 46818001 (-)
XLOC_026727 CR385086.1 coding downstream 367326 46757611 ~ 46762706 (-)
XLOC_026726 NA coding downstream 666776 46462585 ~ 46463256 (-)
XLOC_026732 NA coding upstream 63627 47194738 ~ 47196960 (-)
XLOC_026733 tmed1a coding upstream 90985 47222096 ~ 47235997 (-)
XLOC_026734 tnfsf18 coding upstream 150125 47281236 ~ 47294365 (-)
XLOC_026735 adgrl1a coding upstream 367322 47498433 ~ 47876427 (-)
XLOC_026736 NA coding upstream 696091 47827202 ~ 47833114 (-)
XLOC_026723 CR450782.1 non-coding downstream 903022 46224589 ~ 46227010 (-)
XLOC_026722 NA non-coding downstream 912559 46153127 ~ 46217473 (-)
XLOC_026719 NA non-coding downstream 1286332 45832077 ~ 45843700 (-)
XLOC_026738 NA non-coding upstream 1192429 48323540 ~ 48328133 (-)
XLOC_026739 NA non-coding upstream 1330386 48461497 ~ 48473754 (-)
XLOC_026745 NA non-coding upstream 1868792 48999903 ~ 49001293 (-)

Expression


Co-expression Network