XLOC_026811



Basic Information


Item Value
gene id XLOC_026811
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 54748396 ~ 54784321 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00053143
TGCTGAGaggttttgatgtgtttttgggAGGAGGTTGAGGTCCTTCTTCTCCCAGGTTCAGCTCTGCTTCACATCTGTACTGAGCTCCATCATCAGCTCTGTCTGGATGGATCGGGAGtctaattattttattgactGGACTCTTGGTGTTGTCAGTAAAGTTGGTTTGATTCACCAGAGTTTCTCCTTTGTACCAGTTGACAGTGAGATTCTGAGCAGGAGCCACATTATGAATGTCACACTGGAGCTCATACTGGTTTCCCTCTGTCATTGCTTGATTCGCAGTGCTGATGGAAACACTGTCTGGA

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00053143 True 308 lncRNA 0.46 2 54748396 54784321

Neighbor


gene id symbol gene type direction distance location
XLOC_026810 s1pr2 coding downstream 79211 54616015 ~ 54669185 (-)
XLOC_026809 dnmt1 coding downstream 141230 54591218 ~ 54607166 (-)
XLOC_026808 angptl6 coding downstream 203784 54524227 ~ 54544612 (-)
XLOC_026807 si:ch73-208g10.1 coding downstream 224202 54502350 ~ 54524194 (-)
XLOC_026806 trip10a coding downstream 248042 54431093 ~ 54500354 (-)
XLOC_026812 NA coding upstream 7232 54791553 ~ 54820900 (-)
XLOC_026813 ubald1b coding upstream 49337 54833658 ~ 54846444 (-)
XLOC_026814 NA coding upstream 89080 54873401 ~ 54884180 (-)
XLOC_026815 rhbdf1a coding upstream 112010 54896331 ~ 54993027 (-)
XLOC_026816 nprl3 coding upstream 261025 55045346 ~ 55079742 (-)
XLOC_026805 NA non-coding downstream 905612 53842532 ~ 53842784 (-)
XLOC_026804 BX004869.1 non-coding downstream 1058968 53689310 ~ 53689428 (-)
XLOC_026802 NA non-coding downstream 1159219 53573131 ~ 53589177 (-)
XLOC_026797 NA non-coding downstream 1295614 53449116 ~ 53452782 (-)
XLOC_026796 NA non-coding downstream 1515901 53230710 ~ 53232495 (-)
XLOC_026831 NA non-coding upstream 1054133 55838454 ~ 55839514 (-)
XLOC_026834 CU855917.1 non-coding upstream 1626820 56411141 ~ 56413023 (-)
XLOC_026840 NA non-coding upstream 2252773 57037094 ~ 57037670 (-)

Expression



Co-expression Network