XLOC_027080


Basic Information

Item Value
gene id XLOC_027080
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 7005809 ~ 7020022 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00057597
gtctgcttaatatctgctgatactgctccttcaacagatatttaactgactgtTGAGCATTGTTGATGACCAagaccatccctttatgaccatccCATTGTGTCGTCTTCCAGCAGATCCCTGTTCAATGGAGCATCACCTTTGGGATTTCCTGCAGGGGGAgatttgcttcatttacaaatttacatcagctgtgtgatgccatcatgtcaatatggactacaAATGTTGAGCGGAGTGTTTCCAGAATCTGGATTCATGAAGGTAGAATAGGTCCAGCGCTGCTTTAGTGTGAACCATCGCACCTTTTCTCTTCTGCACTCCCAGCTGTTGTTTACTGCTGAGCTGAAGTCAGTGTACCTGCAAGAGCATCACAGCACTCGTAATAACCCCGCTGCTGTTTTACACATCCTCCGCTATGATCTGACTGTCAAAAGTGCCAAAGTCTGGATCGGCAAGTCAAGGAGAGAAATGCACAGCATCCCTTCACTGCATTCACACCTTTCTCGCCGTGTTGGACTCTCCAGCGTTGGCGTCTCTGCTCCTGGGCTCTGAAATGCCCACTGCCGCTGCTCAGGACATCAGTCAATGTTCTCAGGCAGAAGAGGCCCAGAGGTGCCAGAGAGGAAGACAAAAATAGGCCTgcccatctatctgtctatgACCATCGATCCTCAGTGGCTCAGCCTGGACTTATGAGAGCACTAGAACCATCTGcaaaacagcagcagcagaacaGAAAGTCCCCGTCTCTCGGTTTGTGTCTTTGTTTTTGCTGGAGTGCCGAGGTGAGAGTGGAGCACATGCTGGGCTGCTCCATCAGAACTGCGCTGATAGTTTTTTGGGGAAACACAGCGAGACGTCTGAGGAAAAtggcaaaaacaacaacacaaaaataacGTTGGCTTGACGAGACATTGAAAAATATCCCAGCAGATGCTAATTTGTGAGAacaaaatgcactgtaaaaaataaaaagttgagtaaacttaaaattttaaagcaaccggctgcaaagaaattttgagtttactcaacttcagtggttgaagttgtgccaaattatttttttaagttgactgaaatgGCTGGTTTAAGTCATGACAACTTTCAAGCCTAAGTTCATCTAACTTGTCATTATGAGTTTGCCTAAAATTAAACAGGGGTTgagtaaactgtaataaatgagtTGGCACAACTTAACAGAAGTTCAGTTAACTCAAAGCTGTGCagctggttgccttaattttttaagttgat

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00057597 True 1260 lncRNA 0.44 4 7005809 7020022

Neighbor

gene id symbol gene type direction distance location
XLOC_027077 dock4b coding upstream 11526 6833583 ~ 6994283 (+)
XLOC_027079 CR388190.1 coding upstream 90958 6914716 ~ 6914851 (+)
XLOC_027078 CR388190.2 coding upstream 101570 6903549 ~ 6904239 (+)
XLOC_027076 tmem168a coding upstream 256397 6735053 ~ 6749412 (+)
XLOC_027075 NA coding upstream 310785 6678430 ~ 6695024 (+)
XLOC_027081 FO681360.1 coding downstream 5145 7025167 ~ 7025283 (+)
XLOC_027082 NA coding downstream 91707 7111729 ~ 7112022 (+)
XLOC_027083 FO681358.1 coding downstream 143736 7163758 ~ 7163874 (+)
XLOC_027084 tnni4a coding downstream 371088 7391110 ~ 7409313 (+)
XLOC_027085 NA coding downstream 395258 7415280 ~ 7506470 (+)
XLOC_027071 NA non-coding upstream 497176 6416278 ~ 6508633 (+)
XLOC_027069 NA non-coding upstream 1041938 5957403 ~ 5963871 (+)
XLOC_027087 NA non-coding downstream 525638 7545660 ~ 7595697 (+)

Expression


Co-expression Network