G813100


Basic Information

Item Value
gene id G813100
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 49011646 ~ 49011948 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU925023
gaaccatccagggtggtgatgctagtcgggcgtgcgggtgcaggcagcgaacggttgaaaagcatgcatttggttttactagcgtttaagagcagttggaggccacggaaggagtgttgtatggcgttgaagctcgtttggaggttagatagcacagtgtccaaggaagggccggaagtatacagaatggtgtcgtctgtgtagaggtggatcagggaatcgcccgcagcaagagcaacatcattgatatatacagagaaaagagtcggcccgagaattgaaccctgtggcacccccatagag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU925023 True 303 lncRNA 0.52 1 49011646 49011948

Neighbor

gene id symbol gene type direction distance location
LOC110532278 LOC105027762 coding upstream 13361 48994635 ~ 48998285 (+)
LOC110532277 LOC106572094 coding upstream 17111 48988442 ~ 48994535 (+)
klhdc8b LOC106572099 coding upstream 76314 48831069 ~ 48935332 (+)
si:dkey-32e6.3 LOC106572098 coding upstream 221901 48782956 ~ 48789745 (+)
usp19 NA coding upstream 228907 48747659 ~ 48782739 (+)
LOC110532282 LOC106572092 coding downstream 1215 49013163 ~ 49060073 (+)
LOC110532283 LOC106572090 coding downstream 51740 49063688 ~ 49081175 (+)
LOC110532284 LOC106572089 coding downstream 73876 49085824 ~ 49097702 (+)
LOC110532286 LOC106572086 coding downstream 148499 49160447 ~ 49161689 (+)
mrgbp mrgbp coding downstream 151601 49163549 ~ 49167417 (+)
G813099 NA non-coding upstream 34 49011334 ~ 49011612 (+)
G813074 etbr2 non-coding upstream 4936 48962187 ~ 49006710 (+)
G813076 NA non-coding upstream 36261 48967764 ~ 48975385 (+)
G812969 NA non-coding upstream 68217 48942199 ~ 48943429 (+)
G812968 NA non-coding upstream 72059 48939159 ~ 48939587 (+)
G813125 NA non-coding downstream 70376 49082324 ~ 49082584 (+)
G813128 NA non-coding downstream 72969 49084917 ~ 49085116 (+)
G813135 NA non-coding downstream 91635 49103583 ~ 49103820 (+)
G813137 NA non-coding downstream 94030 49105978 ~ 49106213 (+)
G813140 NA non-coding downstream 103735 49115683 ~ 49116087 (+)
G813071 NA other upstream 51655 48959749 ~ 48959991 (+)
G812688 LOC106572106 other upstream 441053 48545454 ~ 48570593 (+)
G812143 NA other upstream 1029345 47982001 ~ 47982301 (+)
G809685 NA other upstream 2875914 46134731 ~ 46135732 (+)
G813139 NA other downstream 103189 49115137 ~ 49115618 (+)
G815428 NA other downstream 1784266 50796214 ~ 50800381 (+)
G815610 NA other downstream 2066499 51078447 ~ 51078942 (+)
G815767 casz1 other downstream 2333424 51345372 ~ 51346494 (+)
LOC110532349 LOC106591969 other downstream 3311323 52323001 ~ 52325924 (+)

Expression


Co-expression Network