G837427


Basic Information

Item Value
gene id G837427
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 71357524 ~ 71357756 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU952631
CCTCCAAGGGATCCCAGAAGTCCCCAGCATCTATGTTCACGAGTCTTCGAGGTCTGCCGATTCGCCTCTACCGGAGCCGATGCAACTCGGCAGAGCTAGGTTGTCTCCAGCTGAACATTTACTCAGACTTAACACCAAGAGTTGTCTTTATTGTGGGACTATCAGTCAGTTTTCCTCCTCCCCTTACTCGTACCCCTCTCCATGCCATCCTGCTGTGGGGCGACCAGTCAAAA

Function

NR:

description
PREDICTED: cadherin-related family member 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU952631 True 233 lncRNA 0.53 1 71357524 71357756

Neighbor

gene id symbol gene type direction distance location
adora1b LOC106572854 coding upstream 27114 71295615 ~ 71330410 (+)
trnah-gug-4 NA coding upstream 182411 71175042 ~ 71175113 (+)
trnah-gug-3 NA coding upstream 183078 71174375 ~ 71174446 (+)
LOC110532780 LOC106572836 coding upstream 528052 70800184 ~ 70829472 (+)
fam50a fam50a coding upstream 572677 70778341 ~ 70784847 (+)
mmp9 mmp9 coding downstream 7912 71365668 ~ 71374930 (+)
znf335 LOC106572852 coding downstream 18661 71376417 ~ 71415664 (+)
LOC110532798 LOC106572853 coding downstream 57972 71415728 ~ 71422252 (+)
lamtor5 xip coding downstream 104451 71462207 ~ 71466030 (+)
slc16a4 LOC106572850 coding downstream 109961 71467717 ~ 71550293 (+)
G837424 NA non-coding upstream 4008 71353214 ~ 71353516 (+)
G837414 NA non-coding upstream 45222 71311526 ~ 71312302 (+)
G837407 NA non-coding upstream 56410 71300811 ~ 71301114 (+)
G837394 NA non-coding upstream 81038 71275573 ~ 71276486 (+)
G837385 NA non-coding upstream 96749 71260534 ~ 71260775 (+)
G837428 NA non-coding downstream 161 71357917 ~ 71358120 (+)
G837429 NA non-coding downstream 2800 71360556 ~ 71360797 (+)
G837432 NA non-coding downstream 5056 71362812 ~ 71363026 (+)
G837448 NA non-coding downstream 28480 71386236 ~ 71386677 (+)
G837369 NA other upstream 124100 71232786 ~ 71233424 (+)
LOC110532786 LOC106572841 other upstream 597829 70754295 ~ 70759695 (+)
G836374 NA other upstream 1147889 70208678 ~ 70209635 (+)
G836274 LOC106581772 other upstream 1324297 70032992 ~ 70033227 (+)
G835268 LOC106572807 other upstream 1989736 69287276 ~ 69367788 (+)
G837570 NA other downstream 270092 71627848 ~ 71639759 (+)
G837970 LOC106572844 other downstream 489898 71847654 ~ 71848037 (+)
LOC118966113 NA other downstream 577146 71934902 ~ 71937004 (+)

Expression


Co-expression Network