XLOC_028410 (FAR2)


Basic Information

Item Value
gene id XLOC_028410
gene name FAR2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 1988460 ~ 2036620 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00055158
TGCGGCTCTGAACATCTTCACCCGGCGAGATTCATGATCAAGTGTTCAGGAGGAAAGGTGTTCATCTGTCATCTTTCGTCATGGGGTCGATCTCGGAGTGGTACGCGGGGAAGAACGTGCTGATCACGGGTGCCACAGGCTTCATGGGGAAGGTACTGGTGGAGAAACTGCTGCGCTCCTGTCCTGACGTCAACGCTCTCTACATACTGGTCAGACCGAAGGCGGGTCAGTCCATGTCTGAGCGCGTGCAAGACATGATGAAGTGCAAGCTGTTTGACCGCGTGCGTGAAGATAATCCAGAGTTTCATCAGAAGATCATCGCCATCAGCAGTGAATTAATGCAGCCCGGTCTGGCCATCAGTGCACAAGATGTAGAAACACTCACTTCCCGTGTGCACATCGTCTTCCACTGCGCCGCCACCATACGCTTCGACGAGCCGCTCAAGCACGCTCTTCAGCTGAATGTGATGGCGACGCAGCAGCTCCTCTCTCTGGCGCAGCAGATGCAGCAGCTTCAGGCCTTCATCCACATCTCCACCGCATACGCGAACTGCAACCGCAGACACATCGACGAGCTCATCTACCCACCACCCGTCGAGCCCAGAAAACTCATCGACTCCCTCGAgtggatGGATGAAAGTATTATTCGTGACATCACGCCGCGTCTGATCGGTGATTGGCCGAACACCTACACCTACACCAAAGCTCTGGCCGAGTGCGTGGTGCAGCAGGAAAGCGCAAAACTCAACGTGGGCATCGTTCGACCCTCCATAGTGGGAGCCAGCTGGCAGGAGCCCTTCCCCGGTTGGATAGATAACTTCAATGGGCCGAGTGGTGTTTTCATTGCTgctGGGAAGGGTATCCTGCGCACCATGCGGGCCAGTAATGACGCAGTGGCTGATCTGATTCCTGTTGATGTGGTGATCAACCTGACGCTGGCAGCCGGCTGGTACACCGCTGTTAACAAACCTAAAACTGCCCTGGTGTACAACTGCACAACTGGAGGAATAAACCCCTTCCACTGGGGGGAGATCGAGCATCACGTGATGTCAACATTTAAGAGGAATCCTCTTGAACAAGCCTTCCGTCGGCCAAACGCAAACATCACCTCAAACTACCTGATCTACCAGTACTGGATCCTCGTCAGTCACAAAGTCCCGGCGCTGCTGTATGACCTGCTGCTGCGGCTCTCCGGACACAAACCACAaaTGATGCGTATTTTCAACCGTCTGCATAAAGCCATTGGTCTGCTGGAGTATTTCAGCAGTCAGGACTGGGAGTGGAACTCGGATAACATGAACATGCTGATGGCTCAGCTGAGCACCGACGACAGGaagATCTTCAACTTTGACGTTCGTCAGCTGAACTGGCCTGAGTACATCGAGAATTACTGTATCGGCACCAAGAAATACGTTCTGAATGAAGACATGTCCGACATTCCTGCCGCCAGACAACACTTGAGGAAactGAGGAACATCCGCTACACCTTCAACACGGTGCTGCTGGTCTTCATCTGGCGTGTGTTCATCGCCCGCTCTCAGATGGCTCGTAACATCTGGTATTTCGTGGTGAGCCTCTGCTTCAAGTTCCTGTCCTACTTCAGAGCATCCAGCACACTGACACAATGACCACAGCGcacaggaagtgtgtgtgtgtcttcctcTGCCCAGCACTTCCTACTCCAGAGAGGTGTCTTCAGCCatacatatacagacacacacaagcatacagttgaagtctgaattattaggcctCCTATATGTTTATTCCTCCAATTTCAGtataacagagagcagatttttctcaacacatttctaatcataatagttttaataactatttaataactttaataatttctaaaaactgatttattttctctttgtcatgatgacagtcattaatgtttgactagatattcttcaagacactagtattcagcttaaagtgacatttaaagacttaaataggcatatcagggtaaagttagggtaattaggcaagtcattgaccacatttacatggacactattcattcattcattcattttcttgtcggcttagtccctttattaatccagggtcgccacagcggaatgaaccgtcaacttatccagcaagtttttactcagtggatgcccttccagctgcaacccatctctgggaaatacatggacactaataatcacaaaataccattaactaatataataacatttgATGCGTGCCCCCCCGtgacaatatattaaatattgcGATCACTACATTGGTTTCCGGTTCATTTCCTAATAGATTAGAAAATTCTACTCTTTGTTTATAAAACTTTGTACAACCTAGCACCACCGTCTCTTTCTGATCTGATTACTAATAACCCAAACCCGATCGCTTAGATCAAATCCCGACTGCAATCTATTGCAAACACCCCGATCTCGTCTCAAATGCAGGGCCGATGAGCCTTTGCAGTTGTGGGTTTGAAACTATGGATTAAGTTACCATTAAAAATCAGAATAGCACCCACTCGCTGTTAAAGACTCATGTTTTTTCAAGTGCATCTAATATTCCCTTATGGCGGTTCCAGGATGTACTGAATTGCTTCTTTCTTGGAAAGTTTTACTGTTGTTATCATGGCtctatattgttgtttttattgaagtgta
>TCONS_00055159
TGTTCAGGAGGAAAGGTGTTCATCTGTCATCTTTCGTCATGGGGTCGATCTCGGAGTGGTACGCGGGGAAGAACGTGCTGATCACGGGTGCCACAGGCTTCATGGGGAAGGTACTGGTGGAGAAACTGCTGCGCTCCTGTCCTGACGTCAACGCTCTCTACATACTGGTCAGACCGAAGGCGGGTCAGTCCATGTCTGAGCGCGTGCAAGACATGATGAAGTGCAAGCTGTTTGACCGCGTGCGTGAAGATAATCCAGAGTTTCATCAGAAGATCATCGCCATCAGCAGTGAATTAATGCAGCCCGGTCTGGCCATCAGTGCACAAGATGTAGAAACACTCACTTCCCGTGTGCACATCGTCTTCCACTGCGCCGCCACCATACGCTTCGACGAGCCGCTCAAGCACGCTCTTCAGCTGAATGTGATGGCGACGCAGCAGCTCCTCTCTCTGGCGCAGCAGATGCAGCAGCTTCAGGCCTTCATCCACATCTCCACCGCATACGCGAACTGCAACCGCAGACACATCGACGAGCTCATCTACCCACCACCCGTCGAGCCCAGAAAACTCATCGACTCCCTCGAgtggatGGATGAAAGTATTATTCGTGACATCACGCCGCGTCTGATCGGTGATTGGCCGAACACCTACACCTACACCAAAGCTCTGGCCGAGTGCGTGGTGCAGCAGGAAAGCGCAAAACTCAACGTGGGCATCGTTCGACCCTCCATAGTGGGAGCCAGCTGGCAGGAGCCCTTCCCCGGTTGGATAGATAACTTCAATGGGCCGAGTGGTGTTTTCATTGCTgctGGGAAGGGTATCCTGCGCACCATGCGGGCCAGTAATGACGCAGTGGCTGATCTGATTCCTGTTGATGTGGTGATCAACCTGACGCTGGCAGCCGGCTGGTACACCGCTGTTAACAAACCTAAAACTGCCCTGGTGTACAACTGCACAACTGGAGGAATAAACCCCTTCCACTGGGGGGAGATCGAGCATCACGTGATGTCAACATTTAAGAGGAATCCTCTTGAACAAGCCTTCCGTCGGCCAAACGCAAACATCACCTCAAACTACCTGATCTACCAGTACTGGATCCTCGTCAGTCACAAAGTCCCGGCGCTGCTGTATGACCTGCTGCTGCGGCTCTCCGGACACAAACCACAaaTGATGCGTATTTTCAACCGTCTGCATAAAGCCATTGGTCTGCTGGAGTATTTCAGCAGTCAGGACTGGGAGTGGAACTCGGATAACATGAACATGCTGATGGCTCAGCTGAGCACCGACGACAGGaagATCTTCAACTTTGACGTTCGTCAGCTGAACTGGCCTGAGTACATCGAGAATTACTGTATCGGCACCAAGAAATACGTTCTGAATGAAGACATGTCCGACATTCCTGCCGCCAGACAACACTTGAGGAAactGAGGAACATCCGCTACACCTTCAACACGGTGCTGCTGGTCTTCATCTGGCGTGTGTTCATCGCCCGCTCTCAGATGGCTCGTAACATCTGGTATTTCGTGGTGAGCCTCTGCTTCAAGTTCCTGTCCTACTTCAGAGCATCCAGCACACTGACACAATGA

Function

symbol description
far2 Enables fatty-acyl-CoA reductase (alcohol-forming) activity. Involved in long-chain fatty-acyl-CoA metabolic process. Is integral component of peroxisomal membrane.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000009262

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00055158 False 2657 mRNA 0.47 12 1988460 2036620
TCONS_00055159 True 1586 mRNA 0.53 11 1989489 2014406

Neighbor

gene id symbol gene type direction distance location
XLOC_028408 NA coding downstream 9403 1915786 ~ 1979057 (-)
XLOC_028409 si:ch73-177h5.2 coding downstream 58436 1921011 ~ 1930024 (-)
XLOC_028407 ano6 coding downstream 74232 1878573 ~ 1914228 (-)
XLOC_028406 NA coding downstream 132689 1848660 ~ 1855771 (-)
XLOC_028405 pwp1 coding downstream 149108 1825839 ~ 1839352 (-)
XLOC_028411 cpsf6 coding upstream 4447 2041067 ~ 2059302 (-)
XLOC_028412 kcnc2 coding upstream 23904 2060524 ~ 2196928 (-)
XLOC_028413 si:ch73-278m9.1 coding upstream 173697 2210317 ~ 2219705 (-)
XLOC_028414 krr1 coding upstream 222315 2258935 ~ 2265271 (-)
XLOC_028415 phlda1 coding upstream 312715 2349335 ~ 2350371 (-)
XLOC_028393 NA non-coding downstream 728719 1054661 ~ 1259741 (-)
XLOC_028394 NA non-coding downstream 754224 1223164 ~ 1234236 (-)
XLOC_028392 NA non-coding downstream 952414 1028836 ~ 1036046 (-)
XLOC_028417 NA non-coding upstream 355452 2392072 ~ 2440175 (-)
XLOC_028418 NA non-coding upstream 409137 2445757 ~ 2479720 (-)
XLOC_028422 NA non-coding upstream 627548 2664168 ~ 2666870 (-)
XLOC_028427 NA non-coding upstream 1214154 3250774 ~ 3257564 (-)
XLOC_028428 NA non-coding upstream 1269525 3306145 ~ 3308415 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000066_02074798_02093516 FAR1, FAR2 coding CI01000066 null 2074798 ~ 2093516 (-)