XLOC_030192


Basic Information

Item Value
gene id XLOC_030192
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 31911003 ~ 31918136 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00061730
attttgAGGTGACTTGCAGCATCAGCCTCCACGGTCGCTCTCGATGGCTGTAGGACTCACTGAGAAAGCATTTCTGACATCTTTGAGTCAGCTTTTCAGAGTTAAAGAGAGCTTTGGAGAGCAGGAGGACTGCACACACAGAGCAGGCTCTTGCTCATCATAGTCAGTGGAGACTGTGGCAGAAAGTGAGAGGTCCTCTGTGGAGATGGCCAAATCCCCTAGCTTGGCCAGCGAGTTAGACCTTTTGAGTTGGG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00061730 True 254 lncRNA 0.51 2 31911003 31918136

Neighbor

gene id symbol gene type direction distance location
XLOC_030190 iscub coding upstream 42156 31860043 ~ 31868847 (+)
XLOC_030189 zdhhc12b coding upstream 84430 31819436 ~ 31826573 (+)
XLOC_030188 uap1l1 coding upstream 93608 31811662 ~ 31817395 (+)
XLOC_030187 slc25a25b coding upstream 104390 31779911 ~ 31806613 (+)
XLOC_030186 si:dkey-220k22.3 coding upstream 303294 31605322 ~ 31607709 (+)
XLOC_030193 ungb coding downstream 26134 31944270 ~ 31952788 (+)
XLOC_030194 myo1hb coding downstream 41818 31959954 ~ 31981195 (+)
XLOC_030195 ppp6c coding downstream 64962 31983098 ~ 31995401 (+)
XLOC_030196 scai coding downstream 77547 31995683 ~ 32046297 (+)
XLOC_030197 zmat5 coding downstream 157973 32076109 ~ 32080192 (+)
XLOC_030185 CR759893.1 non-coding upstream 362216 31548312 ~ 31548787 (+)
XLOC_030177 NA non-coding upstream 936924 30780430 ~ 30974079 (+)
XLOC_030178 NA non-coding upstream 956482 30952223 ~ 30954521 (+)
XLOC_030174 BX276103.2 non-coding upstream 1183355 30723129 ~ 30727648 (+)
XLOC_030164 BX897688.1 non-coding upstream 1744431 30166456 ~ 30166572 (+)
XLOC_030198 NA non-coding downstream 165593 32083729 ~ 32086577 (+)
XLOC_030204 NA non-coding downstream 342027 32260163 ~ 32264060 (+)
XLOC_030206 NA non-coding downstream 440744 32358880 ~ 32367481 (+)
XLOC_030208 CR376857.1 non-coding downstream 719512 32637648 ~ 32637765 (+)
XLOC_030212 CR925757.1 non-coding downstream 967069 32885205 ~ 32885331 (+)

Expression


Co-expression Network