XLOC_003023



Basic Information


Item Value
gene id XLOC_003023
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 40620981 ~ 40621955 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00005779
TGGCTGCTTTAGGCTATCGCGAGCTCCTGGTCTGATATTTTGGTGAGACTTAGCCATCCTTGAGACTCTGAGACAGTAAAAGTGCAAATAAGAGGAAACAGTTTGTGTCTGAGGTTCCAGCAAAACAGGCCTTCATGAGATTCACTGGCCAAAAGGTTCATATTAGATGACAGAGGTCTGGAAGAACACCCTAAACATCTCCAGAAGGTGATCCACCACGATGCAAGCCAGTAATCAAGtaggaatatttttttaaagtcaaaattatagttcacccataaaattGGAGTCAATAAAATTagttaatttttcaaaatatctaaatttgttgatcagaaaagaaaaataattgatataaatttttgagtgaattatcacAACATATTTGATTTAAGGTGAAGTGTGTAATATAATATCTGTAATACTGGTGGC

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00005779 True 432 lncRNA 0.35 3 40620981 40621955

Neighbor


gene id symbol gene type direction distance location
XLOC_003022 taar16g coding downstream 3414 40616572 ~ 40617567 (-)
XLOC_003021 taar16f coding downstream 8187 40611799 ~ 40612794 (-)
XLOC_003020 taar16a coding downstream 26534 40593443 ~ 40594447 (-)
XLOC_003019 taar16b coding downstream 31205 40588802 ~ 40589776 (-)
XLOC_003018 taar18b coding downstream 63771 40556203 ~ 40557210 (-)
XLOC_003024 BX001050.1 coding upstream 119375 40741330 ~ 40741447 (-)
XLOC_003025 zgc:113625 coding upstream 164241 40786196 ~ 40819136 (-)
XLOC_003026 pcna coding upstream 199849 40821804 ~ 40826657 (-)
XLOC_003027 bmp1b coding upstream 226399 40848354 ~ 40939706 (-)
XLOC_003028 NA coding upstream 229182 40851137 ~ 40857097 (-)
XLOC_003015 CR396590.4 non-coding downstream 82934 40537440 ~ 40538047 (-)
XLOC_003010 CR396590.6 non-coding downstream 99881 40520823 ~ 40521100 (-)
XLOC_003009 BX530037.3 non-coding downstream 103383 40516749 ~ 40517598 (-)
XLOC_003005 NA non-coding downstream 121772 40498159 ~ 40499209 (-)
XLOC_003004 NA non-coding downstream 130344 40489637 ~ 40490637 (-)
XLOC_003029 CU929265.1 non-coding upstream 281166 40903121 ~ 40903237 (-)
XLOC_003040 NA non-coding upstream 1360954 41982909 ~ 41986595 (-)
XLOC_003047 NA non-coding upstream 1691684 42313639 ~ 42355104 (-)

Expression



Co-expression Network