G1162744


Basic Information

Item Value
gene id G1162744
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 29826948 ~ 29827170 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1326011
tagtctattggtaaatagcccacccaatttacctacctcatccccatactgtttatatttatttacttttctgctcttttgcacacgagtatctctacctgtacatgaccatctgatcatttatcactccagtgttaatctgcaaaattgtaattattcgcctacctcctcataccttttgcacacaatgtatatagactcttttttttctactgtgttattg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1326011 True 223 lncRNA 0.35 1 29826948 29827170

Neighbor

gene id symbol gene type direction distance location
LOC110486077 LOC106564801 coding upstream 120800 29655556 ~ 29706148 (+)
LOC110486072 LOC106585018 coding upstream 235043 29498062 ~ 29591905 (+)
LOC110486071 LOC106564807 coding upstream 341135 29444123 ~ 29485813 (+)
LOC110486070 hebp1 coding upstream 398382 29419363 ~ 29436445 (+)
LOC110486069 klc4 coding upstream 417475 29373301 ~ 29409473 (+)
ncx ncx coding downstream 14835 29842005 ~ 29894155 (+)
LOC110485133 LOC106608247 coding downstream 111080 29938250 ~ 30038173 (+)
LOC110486079 LOC106564790 coding downstream 213103 30040273 ~ 30122084 (+)
LOC110486080 LOC106584788 coding downstream 303667 30130837 ~ 30142410 (+)
LOC110486081 LOC106584808 coding downstream 350541 30177711 ~ 30239246 (+)
G1162740 NA non-coding upstream 912 29825209 ~ 29826036 (+)
G1162494 NA non-coding upstream 76599 29743215 ~ 29750349 (+)
G1162447 NA non-coding upstream 107815 29713535 ~ 29719133 (+)
G1162449 NA non-coding upstream 118386 29707937 ~ 29708562 (+)
G1162478 NA non-coding upstream 127687 29699047 ~ 29699261 (+)
G1162746 NA non-coding downstream 164 29827334 ~ 29827547 (+)
G1162748 NA non-coding downstream 1188 29828358 ~ 29828590 (+)
G1162755 NA non-coding downstream 4673 29831843 ~ 29832094 (+)
G1162757 NA non-coding downstream 5052 29832222 ~ 29832512 (+)
G1162806 LOC106585147 non-coding downstream 87316 29914486 ~ 29916624 (+)
G1162364 NA other upstream 332046 29494362 ~ 29494902 (+)
si:ch211-126j24.1 LOC106585260 other upstream 456001 29266618 ~ 29370947 (+)
G1161908 NA other upstream 527292 29298758 ~ 29299656 (+)
G1159924 NA other upstream 1007500 28818734 ~ 28819448 (+)
LOC110487355 LOC106561190 other upstream 1327742 28472333 ~ 28500669 (+)
G1162753 NA other downstream 3584 29830754 ~ 29831296 (+)
LOC110486104 chchd5 other downstream 1287141 31113781 ~ 31119681 (+)
LOC110486134 LOC106600876 other downstream 2174581 32001741 ~ 32159164 (+)
ifn2 ifn2 other downstream 2888086 32714937 ~ 32722676 (+)
LOC110486146 LOC106607468 other downstream 3401943 33001356 ~ 33230495 (+)

Expression


Co-expression Network