G1163275


Basic Information

Item Value
gene id G1163275
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 30287497 ~ 30287697 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1326613
AATCAGTGAAATAAGGcccgctaaccaaggttgccaggtgcacagtgtttcctccgacacattggtgcggctggcttccgggttggatgggttggttaagaagcagtgcggcttggttgtgttgtgtatcggagaccacgaaattggggagaaaaagggagaaaaaaaataaatacaaatacaaataaataaatagacaAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1326613 True 201 lncRNA 0.45 1 30287497 30287697

Neighbor

gene id symbol gene type direction distance location
LOC110486082 LOC106584819 coding upstream 4452 30264043 ~ 30283045 (+)
LOC110486081 LOC106584808 coding upstream 48251 30177711 ~ 30239246 (+)
LOC110486080 LOC106584788 coding upstream 145087 30130837 ~ 30142410 (+)
LOC110486079 LOC106564790 coding upstream 165413 30040273 ~ 30122084 (+)
LOC110485133 LOC106608247 coding upstream 249324 29938250 ~ 30038173 (+)
LOC118938065 LOC106564780 coding downstream 236235 30523932 ~ 30552653 (+)
LOC110486087 LOC106584892 coding downstream 292221 30579918 ~ 30598703 (+)
LOC110486099 NA coding downstream 562883 30850580 ~ 30852604 (+)
LOC110485141 LOC106600922 coding downstream 617101 30904798 ~ 30962319 (+)
LOC110486104 chchd5 coding downstream 826084 31113781 ~ 31119681 (+)
G1163269 NA non-coding upstream 311 30286822 ~ 30287186 (+)
G1163260 NA non-coding upstream 23872 30263411 ~ 30263625 (+)
G1163251 NA non-coding upstream 39846 30247229 ~ 30247651 (+)
G1163249 NA non-coding upstream 43880 30243411 ~ 30243617 (+)
G1163248 NA non-coding upstream 45300 30241995 ~ 30242197 (+)
G1163282 NA non-coding downstream 4907 30292604 ~ 30292855 (+)
G1163292 NA non-coding downstream 26560 30314257 ~ 30314604 (+)
G1163333 LOC106613263 non-coding downstream 102690 30390387 ~ 30390615 (+)
G1163334 NA non-coding downstream 103567 30391264 ~ 30393184 (+)
G1163350 NA non-coding downstream 131585 30419282 ~ 30479952 (+)
G1162753 NA other upstream 456201 29830754 ~ 29831296 (+)
G1162364 NA other upstream 792595 29494362 ~ 29494902 (+)
si:ch211-126j24.1 LOC106585260 other upstream 916550 29266618 ~ 29370947 (+)
G1161908 NA other upstream 987841 29298758 ~ 29299656 (+)
G1159924 NA other upstream 1468049 28818734 ~ 28819448 (+)
LOC110486134 LOC106600876 other downstream 1714054 32001741 ~ 32159164 (+)
ifn2 ifn2 other downstream 2427559 32714937 ~ 32722676 (+)
LOC110486146 LOC106607468 other downstream 2941416 33001356 ~ 33230495 (+)
G1166318 NA other downstream 2952256 33239953 ~ 33249208 (+)

Expression


Co-expression Network