G1165755


Basic Information

Item Value
gene id G1165755
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 32550097 ~ 32550457 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1329398
tatttcacctttatttaaccaggtaggccagttgagaacaagttctcatttacaactacgacctggccaagataaagcaaagcagtgcgacaaaaacaacaacacagagttacacatgggatgaacaaacgtacagtcaataacacaatagaacaacctatgtacagtgtgtgcaaatgtagtaagattaagggaggtaaggcaataaataggccatagaggctaaataattacaatttagcgcTAAGAATTCTCTCTCATCATGTGCCTAATGTGTCCTCAGTAGGCTAGGTCTAAACAATGTCACTCATCAGCCTTGCGAAGGCTCAAACATTgctaaaacagagagagggggagaggg

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1329398 True 361 lncRNA 0.41 1 32550097 32550457

Neighbor

gene id symbol gene type direction distance location
gh2 gh2 coding upstream 21246 32525237 ~ 32528851 (+)
LOC100136790 scn4aa coding upstream 44172 32462211 ~ 32505925 (+)
LOC118938569 NA coding upstream 67506 32482538 ~ 32482591 (+)
LOC110486139 LOC106607458 coding upstream 179449 32290341 ~ 32370648 (+)
LOC110486136 cdc27 coding upstream 260773 32268216 ~ 32289324 (+)
LOC110487530 LOC106595256 coding downstream 1790 32552247 ~ 32566783 (+)
ifn2 ifn2 coding downstream 164480 32714937 ~ 32722676 (+)
LOC118938068 NA coding downstream 269589 32820046 ~ 32824535 (+)
LOC110485150 LOC105907864 coding downstream 274765 32825222 ~ 32826023 (+)
LOC110486141 LOC106607465 coding downstream 276035 32826492 ~ 32843099 (+)
G1165740 NA non-coding upstream 7758 32542043 ~ 32542339 (+)
G1165475 NA non-coding upstream 41961 32506892 ~ 32508136 (+)
G1165418 NA non-coding upstream 286238 32263263 ~ 32263859 (+)
G1165411 NA non-coding upstream 298577 32251306 ~ 32251520 (+)
G1165768 NA non-coding downstream 24394 32574851 ~ 32590340 (+)
G1165814 NA non-coding downstream 107155 32657612 ~ 32672802 (+)
G1165817 NA non-coding downstream 115207 32665664 ~ 32674186 (+)
G1165840 NA non-coding downstream 162784 32713241 ~ 32713805 (+)
G1165885 NA non-coding downstream 237527 32787984 ~ 32788190 (+)
LOC110486134 LOC106600876 other upstream 439364 32001741 ~ 32159164 (+)
LOC110486104 chchd5 other upstream 1430420 31113781 ~ 31119681 (+)
G1162753 NA other upstream 2718801 29830754 ~ 29831296 (+)
G1162364 NA other upstream 3055195 29494362 ~ 29494902 (+)
si:ch211-126j24.1 LOC106585260 other upstream 3179150 29266618 ~ 29370947 (+)
LOC110486146 LOC106607468 other downstream 678656 33001356 ~ 33230495 (+)
G1166318 NA other downstream 689496 33239953 ~ 33249208 (+)
G1166779 NA other downstream 1240183 33790640 ~ 33803665 (+)
LOC110486188 LOC107665142 other downstream 2130731 34680909 ~ 34687670 (+)

Expression


Co-expression Network