XLOC_003068 (CT583727.1)


Basic Information

Item Value
gene id XLOC_003068
gene name CT583727.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 43831882 ~ 43832668 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00005619
cacaggtttacagctcaacctctaaagtcccatatctggctgaggagactggatcatccagaacatcaccagtggaaaaaaggtgtgaatgcatactcaaagcccctaagtgagggagtacatggatgctgggcatgatgaagcgcaaaccttgatgtgcaacaccaccttatgaatctacagtagttacattaacatttagcagactcttttgtctaaagtgacttacaattgaggagacattcagcaaatcaacaagaagaggcgaTACATccaagatgtgctaattatacaaaaaaatttaagaattaagaatgcttctacatgtggtttgtcaagcccacacacctgtgggaagcagacttcatgcacaatgttttgtttttttgttttttagatatagggagtggttgtaagaaagtgtctggtgcaaatgtgcataaatggtgcaagtgtcagagagatgaatgtgtgtagctattgcatgttctgtcatggttggtctaatttatggtgtagtgctgatcgtgttactttgctttaaaatgttaatctttc

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000095585

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00005619 True 558 processed_transcript 0.39 3 43831882 43832668

Neighbor

gene id symbol gene type direction distance location
XLOC_003067 arrdc3b coding downstream 60435 43761480 ~ 43771447 (-)
XLOC_003066 cetn3 coding downstream 72350 43705795 ~ 43759532 (-)
XLOC_003065 mef2ca coding downstream 176433 43544814 ~ 43655449 (-)
XLOC_003062 NA coding downstream 291698 43453171 ~ 43540184 (-)
XLOC_003069 tlr8b coding upstream 5895 43838563 ~ 43850304 (-)
XLOC_003070 mctp1b coding upstream 30296 43862964 ~ 43928937 (-)
XLOC_003071 sept5b coding upstream 103584 43936252 ~ 43964028 (-)
XLOC_003072 acads coding upstream 166595 43999263 ~ 44017665 (-)
XLOC_003073 crybb1 coding upstream 188479 44021147 ~ 44027391 (-)
XLOC_003064 dre-mir-9-2 non-coding downstream 295787 43535960 ~ 43536095 (-)
XLOC_003063 NA non-coding downstream 335666 43484627 ~ 43496216 (-)
XLOC_003057 CU326366.3 non-coding downstream 919835 42911933 ~ 42912047 (-)
XLOC_003053 FP236542.2 non-coding downstream 961733 42799115 ~ 42870149 (-)
XLOC_003075 CABZ01085662.1 non-coding upstream 409568 44242236 ~ 44253104 (-)
XLOC_003076 CABZ01074708.1 non-coding upstream 435813 44268481 ~ 44275885 (-)
XLOC_003080 NA non-coding upstream 548250 44380918 ~ 44387802 (-)
XLOC_003084 CABZ01072084.1 non-coding upstream 661251 44493919 ~ 44501719 (-)
XLOC_003090 NA non-coding upstream 1141568 44974236 ~ 44976643 (-)

Expression


Co-expression Network