G1166735


Basic Information

Item Value
gene id G1166735
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 33607354 ~ 33607579 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1330509
tgcaCAACGGTTTGTGTCAGAAccacaacgctgctgggtttttcatgctcaacagtttcctttgtgtatcaagaatggtccaccactcagagaacatacagccaacttgacacaactgtgggaagcattggagtcaacatgagccagcatccctgtcgagtgctttccacaccttgtagagtccatgccccaacgaattgagactgttctgaaggcaaaagggggg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1330509 True 226 lncRNA 0.49 1 33607354 33607579

Neighbor

gene id symbol gene type direction distance location
csf-3 csf-3 coding upstream 267627 33335447 ~ 33339727 (+)
LOC110486150 psd3 coding upstream 280320 33320635 ~ 33327034 (+)
LOC110485152 LOC106607471 coding upstream 304928 33296758 ~ 33304976 (+)
LOC110486148 LOC106607470 coding upstream 322547 33271079 ~ 33284807 (+)
LOC110486149 LOC106600856 coding upstream 352232 33249232 ~ 33255122 (+)
LOC110486158 LOC106607478 coding downstream 30230 33637809 ~ 33653835 (+)
LOC110486161 LOC106607482 coding downstream 162860 33770439 ~ 33783009 (+)
LOC110485153 LOC106607489 coding downstream 611266 34218845 ~ 34221786 (+)
LOC110486176 LOC106607492 coding downstream 657805 34265384 ~ 34272808 (+)
LOC110486177 LOC106607493 coding downstream 669657 34277236 ~ 34292574 (+)
G1166690 NA non-coding upstream 61824 33543113 ~ 33545530 (+)
G1166591 NA non-coding upstream 147871 33421300 ~ 33459483 (+)
G1166590 LOC100286406 non-coding upstream 175012 33423972 ~ 33432342 (+)
G1166584 NA non-coding upstream 235970 33371155 ~ 33371384 (+)
G1166575 LOC106607474 non-coding upstream 237396 33369236 ~ 33369958 (+)
G1166755 NA non-coding downstream 36845 33644424 ~ 33644627 (+)
G1166783 NA non-coding downstream 84901 33692480 ~ 33693352 (+)
G1166778 NA non-coding downstream 99234 33706813 ~ 33808708 (+)
G1166802 NA non-coding downstream 116771 33724350 ~ 33724775 (+)
G1166809 NA non-coding downstream 125774 33733353 ~ 33733843 (+)
G1166318 NA other upstream 358146 33239953 ~ 33249208 (+)
LOC110486146 LOC106607468 other upstream 376871 33001356 ~ 33230495 (+)
ifn2 ifn2 other upstream 884892 32714937 ~ 32722676 (+)
LOC110486134 LOC106600876 other upstream 1496621 32001741 ~ 32159164 (+)
LOC110486104 chchd5 other upstream 2487677 31113781 ~ 31119681 (+)
G1166779 NA other downstream 183061 33790640 ~ 33803665 (+)
LOC110486188 LOC107665142 other downstream 1073609 34680909 ~ 34687670 (+)
G1169121 LOC106607257 other downstream 2382277 35989856 ~ 35992600 (+)
G1169207 NA other downstream 2560049 36167628 ~ 36168331 (+)
G1169208 NA other downstream 2562317 36169896 ~ 36171571 (+)

Expression


Co-expression Network