Gene
RNA
| Item | Value |
|---|---|
| gene id | G1166755 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 33644424 ~ 33644627 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1330531 | True | 204 | lncRNA | 0.44 | 1 | 33644424 | 33644627 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| csf-3 | csf-3 | coding | upstream | 304697 | 33335447 ~ 33339727 (+) |
| LOC110486150 | psd3 | coding | upstream | 317390 | 33320635 ~ 33327034 (+) |
| LOC110485152 | LOC106607471 | coding | upstream | 341998 | 33296758 ~ 33304976 (+) |
| LOC110486148 | LOC106607470 | coding | upstream | 359617 | 33271079 ~ 33284807 (+) |
| LOC110486149 | LOC106600856 | coding | upstream | 389302 | 33249232 ~ 33255122 (+) |
| LOC110486161 | LOC106607482 | coding | downstream | 125812 | 33770439 ~ 33783009 (+) |
| LOC110485153 | LOC106607489 | coding | downstream | 574218 | 34218845 ~ 34221786 (+) |
| LOC110486176 | LOC106607492 | coding | downstream | 620757 | 34265384 ~ 34272808 (+) |
| LOC110486177 | LOC106607493 | coding | downstream | 632609 | 34277236 ~ 34292574 (+) |
| LOC110486178 | LOC106607494 | coding | downstream | 664827 | 34309454 ~ 34366289 (+) |
| G1166735 | NA | non-coding | upstream | 36845 | 33607354 ~ 33607579 (+) |
| G1166690 | NA | non-coding | upstream | 98894 | 33543113 ~ 33545530 (+) |
| G1166591 | NA | non-coding | upstream | 184941 | 33421300 ~ 33459483 (+) |
| G1166590 | LOC100286406 | non-coding | upstream | 212082 | 33423972 ~ 33432342 (+) |
| G1166584 | NA | non-coding | upstream | 273040 | 33371155 ~ 33371384 (+) |
| G1166783 | NA | non-coding | downstream | 47853 | 33692480 ~ 33693352 (+) |
| G1166778 | NA | non-coding | downstream | 62186 | 33706813 ~ 33808708 (+) |
| G1166802 | NA | non-coding | downstream | 79723 | 33724350 ~ 33724775 (+) |
| G1166809 | NA | non-coding | downstream | 88726 | 33733353 ~ 33733843 (+) |
| G1167108 | NA | non-coding | downstream | 188562 | 33833189 ~ 33833393 (+) |
| G1166318 | NA | other | upstream | 395216 | 33239953 ~ 33249208 (+) |
| LOC110486146 | LOC106607468 | other | upstream | 413941 | 33001356 ~ 33230495 (+) |
| ifn2 | ifn2 | other | upstream | 921962 | 32714937 ~ 32722676 (+) |
| LOC110486134 | LOC106600876 | other | upstream | 1533691 | 32001741 ~ 32159164 (+) |
| LOC110486104 | chchd5 | other | upstream | 2524747 | 31113781 ~ 31119681 (+) |
| G1166779 | NA | other | downstream | 146013 | 33790640 ~ 33803665 (+) |
| LOC110486188 | LOC107665142 | other | downstream | 1036561 | 34680909 ~ 34687670 (+) |
| G1169121 | LOC106607257 | other | downstream | 2345229 | 35989856 ~ 35992600 (+) |
| G1169207 | NA | other | downstream | 2523001 | 36167628 ~ 36168331 (+) |
| G1169208 | NA | other | downstream | 2525269 | 36169896 ~ 36171571 (+) |
