Gene
RNA
| Item | Value |
|---|---|
| gene id | XLOC_003084 |
| gene name | CABZ01072084.1 |
| gene type | non-coding |
| species | zebrafish (Danio rerio) |
| category of species | model fish |
| Item | Value |
|---|---|
| chromosome id | NC_007121.7 |
| NCBI id | CM002894.2 |
| chromosome length | 45420867 |
| location | 44493919 ~ 44501719 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| id | name | namespace |
|---|---|---|
| GO:0001704 | formation of primary germ layer | biological_process |
| GO:0048729 | tissue morphogenesis | biological_process |
| GO:0001706 | endoderm formation | biological_process |
| GO:0045995 | regulation of embryonic development | biological_process |
| GO:0001714 | endodermal cell fate specification | biological_process |
| GO:0007492 | endoderm development | biological_process |
| GO:0007498 | mesoderm development | biological_process |
| GO:0043011 | myeloid dendritic cell differentiation | biological_process |
| GO:0036342 | post-anal tail morphogenesis | biological_process |
| GO:0003401 | axis elongation | biological_process |
| GO:0001773 | myeloid dendritic cell activation | biological_process |
| GO:0009888 | tissue development | biological_process |
| GO:1903224 | regulation of endodermal cell differentiation | biological_process |
| GO:0010453 | regulation of cell fate commitment | biological_process |
| GO:0060974 | cell migration involved in heart formation | biological_process |
| GO:0060975 | cardioblast migration to the midline involved in heart field formation | biological_process |
| GO:0010470 | regulation of gastrulation | biological_process |
| GO:0003260 | cardioblast migration | biological_process |
| GO:0060795 | cell fate commitment involved in formation of primary germ layer | biological_process |
| GO:0060026 | convergent extension | biological_process |
| GO:0060028 | convergent extension involved in axis elongation | biological_process |
| GO:0060029 | convergent extension involved in organogenesis | biological_process |
| GO:0042659 | regulation of cell fate specification | biological_process |
| GO:0042663 | regulation of endodermal cell fate specification | biological_process |
| ensembl_id | ENSDARG00000117504 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TCONS_00005646 | False | 1955 | lncRNA | 0.45 | 7 | 44493919 | 44501719 |
| TCONS_00005645 | True | 1847 | lncRNA | 0.44 | 6 | 44493919 | 44501719 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| XLOC_003083 | hip1ra | coding | downstream | 11008 | 44473851 ~ 44482911 (-) |
| XLOC_003082 | ccdc62 | coding | downstream | 26535 | 44462447 ~ 44467384 (-) |
| XLOC_003081 | CABZ01072096.1 | coding | downstream | 82887 | 44408675 ~ 44411032 (-) |
| XLOC_003080 | NA | coding | downstream | 106117 | 44380918 ~ 44387802 (-) |
| XLOC_003079 | sbno1 | coding | downstream | 138385 | 44309997 ~ 44355534 (-) |
| XLOC_003085 | DUSP26 | coding | upstream | 2100 | 44503819 ~ 44508249 (-) |
| XLOC_003086 | CABZ01072083.2 | coding | upstream | 11512 | 44513231 ~ 44517186 (-) |
| XLOC_003087 | npm2b | coding | upstream | 50829 | 44552548 ~ 44560302 (-) |
| XLOC_003088 | tacr1b | coding | upstream | 267331 | 44769050 ~ 44788554 (-) |
| XLOC_003089 | tuba7l | coding | upstream | 415632 | 44917351 ~ 44924289 (-) |
| XLOC_003076 | CABZ01074708.1 | non-coding | downstream | 218034 | 44268481 ~ 44275885 (-) |
| XLOC_003075 | CABZ01085662.1 | non-coding | downstream | 240815 | 44242236 ~ 44253104 (-) |
| XLOC_003068 | CT583727.1 | non-coding | downstream | 661251 | 43831882 ~ 43832668 (-) |
| XLOC_003064 | dre-mir-9-2 | non-coding | downstream | 957824 | 43535960 ~ 43536095 (-) |
| XLOC_003090 | NA | non-coding | upstream | 472517 | 44974236 ~ 44976643 (-) |
| XLOC_003094 | NA | non-coding | upstream | 545510 | 45047229 ~ 45051538 (-) |
| XLOC_003097 | NA | non-coding | upstream | 853905 | 45355624 ~ 45357482 (-) |
