XLOC_030856 (CR936408.1)


Basic Information

Item Value
gene id XLOC_030856
gene name CR936408.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 10003458 ~ 10007897 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00060006
TGCTTTACAGTGTGTTTGCCATAATCATCAGTGTCTATCGATCTTCTACTTCTTCTGTTTCGTCATTGCGTTTGTCACCAGCATGTCGACCATTGATTTTGACCATCTTTCCAATCTGATTCCTGCCTCTCTGTCACCTGAGAGCGCAGAAGAGCTCGCCACGGCCCTCTCCACCGGCCGCTGGTGGGCTATCATGGAGGTTTTACACCCCATCGATGAGGAGCGTCAGTTTGACCTCACTTCAGTTCACCAGAGTCAAACTGTGGAGGACGCGTCTTCTGCGTCTGGTCCAGCAGAGACAGCAGATGCGTCCTCCGTCCCTGAGGCCTCAGATGAGCTCGCCACTGCCCTCGCTGCAGGGGCTATCGTAGAGGTTGAGCACCCTATTGAGGAGCCTCAGGTTGACATCTCCTTAGTGCCGTTTTTGGAGGCACCAGAAACATCACCAGGAGCTTCTGTGCCTGAGAACGGGGAACCCACCACATCCCCAGTCCTCAAGAGCCAGATAGAGTCGCCTGGAGCTCCCGTATATGCCGAGTCTGACACCCCGGGCTTTCTTTTTTTCGGAAATCAAAACCCCACGCCTGCTGAGCCAGCTTTGGCCCCACCTGTCTCTTCTGACAACAGAGACGTGTTTCAGACGGTTTCAGCGGAACCTAAAGATTATAGAAGATTTCGAAGAGTTTCGAGGTGTCGCCGGTCTTCAACTCTGCTGAAGATAAGGGAGGCATGGCTTAAAGAATTTGCGAAACACATGCCTCTTCAGAACCAGCAGCATGTGGAGGCTGTAGCCAGTAGGGGACAAAATCGAATCCCTGAACCACAACCTGAGGAGCAGCCTGAAAGACCTCTGCAGAGAGATGTAAATGAATTAATCCATGAGATTCTTTCTGGTCTTCAGCCTGCTCGTCCTCCTAGAGAAATCAGAGAACCGGATGAAGCATTTGTGAATCAGATGCCTCATCAGAACCAGCAGCATGTGGAGGCTGTAGCCAGTCGGGGACAAAATCAGATTCCTGTACCACAGCCTGAGGAGCAACCTGAAAGACCTCAGCAGAGAGATTTAATAATAAATGGAAGAGTCCGTGGGGTTCTGCGTGGTCTTCAGTCTGCTCGTCCTCTCAGAAGAATGAGAGAACAGGATGAAGCATTTGTGAACCAGATGCCTCATCAGAACCAGCAGCATGTGGAGGCTGTAGCCAGTAGGGGACAAAATCGTATCCCTGAACCACAGCCTGAGGAGCAGCAACAGAATGAACCTGAGAGACCTCAGCAGAGAGATTTAATAATAAATGGAAGAGTCCGAGGGGTTCTGCGTGGTCTTCAGTCTGCTCGCCCTCTCAGAAGAATGAGAGAACAGGATGAAGCATTTGTGAACCAGATGCCTCATCAGAACCAGCAGCATGTGGAGGCTGTAGCCAGTAGGGGACCAAATCGGATCCCTGAACCACAGCCTGAGGAGCAGCAACAGAATGAACCTGAGAGACCTCAGCAGAGAGATTTAATAATAAATGGAAGAGTCCGTGGGGTTCTGCGTGGTCTTCAGTCTGCTCGTCCTCTCAGAAGAATGAGAGAACAGCAGGACGACATTGTCAATCTCCAGAACCCTCCTCTCCGGCAACCTCGGCCTGGTCCACCGCCTATCTACATTCGCAGGTCGGTGGTGGGCAGCATTGGAGATTTTGCACGCCATTGATGAGGAGCCTGAAAGATCAGCCTcaaagatgaacaaataaatcaataaagagATTTTTAAACA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000078938

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00060006 True 1759 mRNA 0.51 8 10003458 10007897

Neighbor

gene id symbol gene type direction distance location
XLOC_030855 WDR31 coding downstream 1198 9983350 ~ 10002260 (-)
XLOC_030854 tor4ab coding downstream 54961 9894143 ~ 9948497 (-)
XLOC_030853 NA coding downstream 121054 9880188 ~ 9882404 (-)
XLOC_030852 zgc:158343 coding downstream 178550 9823754 ~ 9824908 (-)
XLOC_030851 ddr2l coding downstream 210185 9699922 ~ 9793273 (-)
XLOC_030857 CR936408.2 coding upstream 4025 10011922 ~ 10012971 (-)
XLOC_030858 chek2 coding upstream 48083 10055980 ~ 10082244 (-)
XLOC_030859 NA coding upstream 207617 10215514 ~ 10217606 (-)
XLOC_030860 si:ch73-42k18.1 coding upstream 224296 10232193 ~ 10239079 (-)
XLOC_030861 NA coding upstream 481040 10488937 ~ 10500797 (-)
XLOC_030846 AL845369.2 non-coding downstream 824022 9173538 ~ 9179436 (-)
XLOC_030845 AL845369.1 non-coding downstream 832924 9166395 ~ 9170534 (-)
XLOC_030844 NA non-coding downstream 856681 9144367 ~ 9146777 (-)
XLOC_030843 NA non-coding downstream 875899 9107085 ~ 9127559 (-)
XLOC_030862 BX511089.3 non-coding upstream 499929 10507826 ~ 10508814 (-)
XLOC_030863 CR790366.3 non-coding upstream 712997 10720894 ~ 10724665 (-)
XLOC_030865 NA non-coding upstream 959902 10967799 ~ 10971601 (-)

Expression


Co-expression Network