Gene
RNA
| Item | Value |
|---|---|
| gene id | G1190242 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 57152287 ~ 57152702 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| mitochondrial thiamine pyrophosphate carrier-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1357606 | True | 416 | lncRNA | 0.50 | 1 | 57152287 | 57152702 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110485244 | LOC106601809 | coding | downstream | 22845 | 57112909 ~ 57129442 (-) |
| nduba | LOC106601814 | coding | downstream | 52509 | 57094312 ~ 57099778 (-) |
| LOC110486894 | LOC106601810 | coding | downstream | 66766 | 57054453 ~ 57085521 (-) |
| LOC110486860 | tom1l2 | coding | downstream | 144297 | 56960592 ~ 57007990 (-) |
| LOC110486859 | srebf1 | coding | downstream | 194641 | 56911365 ~ 56957646 (-) |
| LOC110486881 | LOC106606582 | coding | upstream | 9273 | 57161975 ~ 57164019 (-) |
| LOC110516439 | LOC106601803 | coding | upstream | 22294 | 57174996 ~ 57189319 (-) |
| LOC118936526 | LOC106606576 | coding | upstream | 455318 | 57598591 ~ 57612663 (-) |
| LOC118938332 | LOC106606586 | coding | upstream | 507205 | 57659907 ~ 57664396 (-) |
| LOC110486912 | LOC106601792 | coding | upstream | 513513 | 57666215 ~ 57697821 (-) |
| G1190191 | NA | non-coding | downstream | 59349 | 57090690 ~ 57092938 (-) |
| G1190225 | NA | non-coding | downstream | 75137 | 57076416 ~ 57077150 (-) |
| G1190243 | NA | non-coding | upstream | 4 | 57152706 ~ 57152967 (-) |
| G1190265 | NA | non-coding | upstream | 43731 | 57196433 ~ 57250738 (-) |
| G1190268 | NA | non-coding | upstream | 46890 | 57199592 ~ 57241428 (-) |
| G1190281 | NA | non-coding | upstream | 65997 | 57218699 ~ 57219683 (-) |
| G1190260 | LOC106606635 | non-coding | upstream | 74239 | 57226941 ~ 57272116 (-) |
| G1190199 | LOC106601813 | other | downstream | 62372 | 57089171 ~ 57089915 (-) |
| G1189660 | LOC106601786 | other | downstream | 478049 | 56670293 ~ 56674238 (-) |
| LOC110485237 | LOC106606659 | other | downstream | 1041303 | 56088292 ~ 56110984 (-) |
| G1189279 | LOC106601786 | other | downstream | 1236402 | 55912224 ~ 55915885 (-) |
| G1190405 | NA | other | upstream | 343286 | 57495988 ~ 57499155 (-) |
| LOC110486915 | LOC106606556 | other | upstream | 546549 | 57698059 ~ 57706813 (-) |
| G1190628 | NA | other | upstream | 813435 | 57964952 ~ 57994099 (-) |
| LOC110514412 | NA | other | upstream | 1434623 | 58561680 ~ 58588526 (-) |
| LOC110486955 | NA | other | upstream | 1444074 | 58588778 ~ 58603975 (-) |
