XLOC_003159 (dre-mir-724)



Basic Information


Item Value
gene id XLOC_003159
gene name dre-mir-724
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 3176686 ~ 3176770 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00006233
CAGCAGACTGGATTTAAAGGGAATTTGCGACTGTTAGTCAGATTTGTAGAACAGCCACACCTTCCTTTTAAGATCTTGCCTGCTG

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000080608

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00006233 True 85 miRNA 0.44 1 3176686 3176770

Neighbor


gene id symbol gene type direction distance location
XLOC_003157 kif21b coding upstream 202619 2855430 ~ 2974067 (+)
XLOC_003156 CT583672.1 coding upstream 348011 2827553 ~ 2828675 (+)
XLOC_003155 srpk1b coding upstream 350124 2763168 ~ 2826562 (+)
XLOC_003154 mapk14b coding upstream 416313 2710530 ~ 2760373 (+)
XLOC_003153 tmem167b coding upstream 469658 2699951 ~ 2707028 (+)
XLOC_003160 NA coding downstream 26717 3203487 ~ 3206698 (+)
XLOC_003161 timeless coding downstream 35056 3211826 ~ 3272020 (+)
XLOC_003162 mmp19 coding downstream 102269 3279039 ~ 3291771 (+)
XLOC_003163 sarnp coding downstream 131886 3308656 ~ 3318747 (+)
XLOC_003164 NA coding downstream 154343 3331113 ~ 3333714 (+)
XLOC_003250 BX324177.11 misc downstream 8169033 11345803 ~ 11346099 (+)
XLOC_003255 BX324177.14 misc downstream 8196116 11372886 ~ 11373182 (+)
XLOC_003257 BX324177.13 misc downstream 8209592 11386362 ~ 11386658 (+)
XLOC_003260 BX324177.2 misc downstream 8241263 11418033 ~ 11418323 (+)
XLOC_003262 BX324177.15 misc downstream 8252623 11429393 ~ 11429689 (+)
XLOC_003149 FQ790208.1 non-coding upstream 560663 2615070 ~ 2616023 (+)
XLOC_003140 NA non-coding upstream 856331 2308209 ~ 2320355 (+)
XLOC_003139 NA non-coding upstream 970888 2198530 ~ 2205798 (+)
XLOC_003138 mir196c non-coding upstream 985956 2190621 ~ 2190730 (+)
XLOC_003169 NA non-coding downstream 438980 3615750 ~ 3735803 (+)
XLOC_003170 NA non-coding downstream 594496 3771266 ~ 3783125 (+)
XLOC_003176 CR559931.1 non-coding downstream 2304983 5481753 ~ 5481884 (+)

Expression



Co-expression Network