XLOC_031776


Basic Information

Item Value
gene id XLOC_031776
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 3419776 ~ 3422733 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00064796
GCATTTCTGTTGTGTTGCAAGGGCGAGCTTTAGATTGATGGCGTTGGTCAGCATGTGCAATTTCACACTGGCTCAGACGAGgggAACTTTGTGTACCAGGGATTGTGAAAACACGCAGTCTGGCTTCCTGAGCGAACTCCATCACATCTGTCTGGACGCAGGTCATCTGTGATCGCACTACGGGGACCGAATTTCCCTCACTCTATGGCGTGGGCATTTGCTTCGCAGCGTCTGAGATCAGCTCAGAAACGGCCTGAGCTGCGGCCAATCTTGATAAACACAGCCGCTCAGAAAATCAGCACTTTGCATTGTGGGAAAGCGTGTTGTTTGCTTACCTGTCAGATCTAGTGTTGAGATCTAGAGCGCTGATTTTTTTGTAGGAGCCGTGAAGTGATGCAGTCGCTGATAAGAAGGCAGTGTCTGATTGAGCCAGAAAAGGTGTTGGTATTTGACCTCACAATCAAAATGTCTCGTTATTCAATTAAAATGTCActgattttctttcatttttttgtagCATTGCATTGCAATTTGGCTGCGTAATGTTGCTATTACAATGTGCCAAACTGAAATATAGCCGATTTATTTTGGGGTGGA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00064796 True 597 lncRNA 0.46 3 3419776 3422733

Neighbor

gene id symbol gene type direction distance location
XLOC_031775 st3gal3a coding upstream 14281 3334392 ~ 3405495 (+)
XLOC_031774 kdm4aa coding upstream 100634 3280939 ~ 3319142 (+)
XLOC_031772 ptprfa coding upstream 143724 2951645 ~ 3276052 (+)
XLOC_031773 BX255959.1 coding upstream 254054 3165608 ~ 3165722 (+)
XLOC_031771 NA coding upstream 799438 2617389 ~ 2620338 (+)
XLOC_031777 artna coding downstream 36293 3459026 ~ 3459340 (+)
XLOC_031778 rad54l coding downstream 50924 3473657 ~ 3491357 (+)
XLOC_031779 faah coding downstream 93962 3516695 ~ 3540267 (+)
XLOC_031780 NA coding downstream 152318 3575051 ~ 3581291 (+)
XLOC_031781 col28a2b coding downstream 217648 3640381 ~ 3675797 (+)
XLOC_031770 LO018168.1 non-coding upstream 826276 2519973 ~ 2593500 (+)
XLOC_031769 LO017858.1 non-coding upstream 913324 2491733 ~ 2506452 (+)
XLOC_031766 CU638693.1 non-coding upstream 1177092 2235893 ~ 2242684 (+)
XLOC_031787 NA non-coding downstream 393316 3816049 ~ 3826125 (+)
XLOC_031790 NA non-coding downstream 454939 3877672 ~ 3879215 (+)
XLOC_031792 CU914157.1 non-coding downstream 578584 4001317 ~ 4004456 (+)
XLOC_031798 NA non-coding downstream 1095425 4518158 ~ 4520247 (+)

Expression


Co-expression Network