XLOC_032132


Basic Information

Item Value
gene id XLOC_032132
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 32970553 ~ 33037109 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00064869
ACTTACACGAACGCCATTAATACTGATTGATTAAAGGAGAACTGAATGTGGACTTAAGCATGAACGCTGTTGCCTTCACTAATCACGAAATGTCGTTATCGGCTTCAAGTCTCTGTTACCGCATACGTCGGATGACTTGTGATGTGGGGAGGAGCTTACCgtgatgatggggttcgagtccaatGAGGAACAGctccagaaaacagAGTGTGTTTATCTGTGTGCTTTTGGAGCAGTTCCACTCTATG
>TCONS_00064662
ATGAAGCCTTATTGTAAATGTGCAATGTGAACAATAGCCCTAaagataattataatattttagtcaatatCTCAGGCATGTTGTAGGCCAGATTAACATGtgaatgtactgtatgtatatttcAAATTTAATAGACGTTTAGGCTTTCTAAAAGTTCAAATAATACATGTTTATTAACATGTATTCAGTAATTTGAAGTGCCCACAATCACAATATGATTTGAGACACAATAACGATGATTCGTTATCGCAGTAATGAAATTTTAATATACAGTGCTtaacatatatgagtacacccccacaaatctctcatttaaattagtattttctctaggatgctttacaatatcatatttgtgcatatacattagattagtctgtactgaagccaaacctggagcttatctaacaaaataacttacagtaATGTTCTAAAATTTCttgttaaaattaactttaaaaagtgTGTATTCTCTTATTTGTAGAGTGTGTTTATCTGTGTGCTTTTGGAGCAGTTCCACTCTATGTAAATCTC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00064869 False 248 lncRNA 0.45 3 32970553 33037101
TCONS_00064662 True 534 lncRNA 0.30 1 33036576 33037109

Neighbor

gene id symbol gene type direction distance location
XLOC_032131 ghrhrb coding upstream 9424 32882821 ~ 32961129 (+)
XLOC_032130 cyldl coding upstream 125825 32834007 ~ 32844728 (+)
XLOC_032129 NA coding upstream 375396 32520099 ~ 32595157 (+)
XLOC_032128 kank4 coding upstream 463255 32410848 ~ 32507298 (+)
XLOC_032127 dock7 coding upstream 565920 32326074 ~ 32404633 (+)
XLOC_032133 NA coding downstream 490 33037599 ~ 33039353 (+)
XLOC_032134 pomgnt1 coding downstream 39730 33076839 ~ 33095766 (+)
XLOC_032135 NA coding downstream 243244 33280353 ~ 33281036 (+)
XLOC_032136 pik3r3b coding downstream 500158 33537267 ~ 33558977 (+)
XLOC_032137 CR855206.3 coding downstream 776179 33813288 ~ 33835181 (+)
XLOC_032126 NA non-coding upstream 646786 32320730 ~ 32323767 (+)
XLOC_032125 NA non-coding upstream 822821 32138926 ~ 32147732 (+)
XLOC_032124 NA non-coding upstream 863061 32093848 ~ 32107492 (+)
XLOC_032122 NA non-coding upstream 1134599 31826335 ~ 31835954 (+)
XLOC_032138 CR855206.2 non-coding downstream 780582 33817691 ~ 33819979 (+)
XLOC_032141 NA non-coding downstream 944530 33981639 ~ 33982494 (+)

Expression


Co-expression Network