G1364424


Basic Information

Item Value
gene id G1364424
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 32139138 ~ 32191970 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1559191
ctgatggagtctgcaaaagacctgagactgggacggagatttgtcttccaacaagacaatgatccaaaacataaagcaaaatctacaatggaatggttcaaaaataaacatatccaggtgttggaatggccaagtcaaagtccagacctgaatccaatcgagaatctgtagaaagaactgaaaactgctgttcacaaatgctctccatccaacctcactgagctcgagctgttttgcaaggaggaatgggaaaaaatgtcagtctctcgatgtgcaaaactgatagagacataccccaagcgacttacagctgtaatcgcaacaaaaggtggcgctacaaagtattaacttaagggggctgaat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1559191 True 364 lncRNA 0.43 2 32139138 32191970

Neighbor

gene id symbol gene type direction distance location
LOC110491822 LOC106567384 coding downstream 43005 32056948 ~ 32096133 (-)
LOC110491823 NA coding downstream 52352 32081707 ~ 32086786 (-)
LOC110491820 LOC106567387 coding downstream 149342 31966722 ~ 31989796 (-)
ttc34 ttc34 coding downstream 181136 31950519 ~ 31958002 (-)
si:ch211-28p3.4 LOC106579421 coding downstream 410195 31712301 ~ 31728943 (-)
LOC110491825 LOC100380856 coding upstream 38317 32230287 ~ 32350853 (-)
pigt LOC106567380 coding upstream 244257 32436227 ~ 32466311 (-)
LOC110491830 LOC106567378 coding upstream 426778 32618748 ~ 32628980 (-)
LOC110491831 LOC106567377 coding upstream 444576 32636546 ~ 32735446 (-)
LOC110491834 NA coding upstream 776874 32968844 ~ 32970270 (-)
G1364341 NA non-coding downstream 82584 32054609 ~ 32056554 (-)
G1364366 NA non-coding downstream 94045 32044591 ~ 32045093 (-)
G1364358 NA non-coding downstream 106448 32032351 ~ 32032690 (-)
G1364357 NA non-coding downstream 106908 32031894 ~ 32032230 (-)
G1364347 LOC106581475 non-coding downstream 121491 32017413 ~ 32017647 (-)
G1364465 NA non-coding upstream 4452 32196422 ~ 32196717 (-)
G1364475 NA non-coding upstream 10164 32202134 ~ 32202363 (-)
G1364504 NA non-coding upstream 29861 32221831 ~ 32223847 (-)
G1364736 NA non-coding upstream 189252 32381222 ~ 32381591 (-)
G1364753 NA non-coding upstream 200477 32392447 ~ 32392683 (-)
G1364348 NA other downstream 119640 32018794 ~ 32019498 (-)
G1364105 NA other downstream 253026 31885749 ~ 31886112 (-)
G1363836 NA other downstream 488441 31639437 ~ 31650697 (-)
G1361619 NA other downstream 2213984 29923871 ~ 29925154 (-)
G1361290 NA other downstream 2641583 29497113 ~ 29497555 (-)
G1365099 NA other upstream 442495 32634465 ~ 32635511 (-)
G1366703 NA other upstream 1492041 33684011 ~ 33684473 (-)
G1366756 NA other upstream 1555430 33747400 ~ 33751407 (-)
LOC110491043 NA other upstream 1671536 33863087 ~ 33870055 (-)
LOC110491862 tnfrsf6b other upstream 2886131 35077807 ~ 35079706 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
striped catfish (Pangasianodon hypophthalmus) G325268 NA non-coding NC_047616.1 CM018562.1 2396673 ~ 2396887 (+)