XLOC_003289 (BX469912.13)


Basic Information

Item Value
gene id XLOC_003289
gene name BX469912.13
gene type misc
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 12223462 ~ 12223758 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00006466
gccgggttcagtggcgcgcgcctgtaatccaagctactgggaggctgaggctgcggatcgcttgagctcagggcttctggGCTGCAGTGGACTATGTTGATCGGGTGTCCGCGCTAAGTTCGGTATCGATATGGTTCTCCTGGGGGAGCTCGGGACCACCAGGTCGTTTAAGGAGGGGTGAACCGGCCCAGGTCGGAGACGGAGCAGGTCAAATCCCCCGTGCCGATCAGTAGTGGGATTGCGCCTGTGAATAGACACTGCAGTGCAGCCTGAgcgacacagagagacgcagacttT

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000114352

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00006466 True 297 misc_RNA 0.60 1 12223462 12223758

Neighbor

gene id symbol gene type direction distance location
XLOC_003284 si:ch211-156l18.7 coding upstream 38919 12175162 ~ 12184543 (+)
XLOC_003282 NA coding upstream 56672 12166486 ~ 12166790 (+)
XLOC_003280 si:ch211-156l18.8 coding upstream 131284 12052791 ~ 12092178 (+)
XLOC_003279 zgc:64002 coding upstream 243608 11974708 ~ 11979854 (+)
XLOC_003278 NA coding upstream 319952 11891240 ~ 11903510 (+)
XLOC_003302 NA coding downstream 243008 12466766 ~ 12467060 (+)
XLOC_003304 NA coding downstream 270114 12493872 ~ 12494177 (+)
XLOC_003307 NA coding downstream 299012 12522770 ~ 12523029 (+)
XLOC_003319 NA coding downstream 494351 12718109 ~ 12718402 (+)
XLOC_003320 ap1s2 coding downstream 496186 12719944 ~ 12728353 (+)
XLOC_003288 BX469912.2 misc upstream 7834 12215328 ~ 12215628 (+)
XLOC_003287 BX469912.15 misc upstream 14257 12208909 ~ 12209205 (+)
XLOC_003286 BX469912.6 misc upstream 33438 12189725 ~ 12190024 (+)
XLOC_003285 BX469912.9 misc upstream 35860 12187306 ~ 12187602 (+)
XLOC_003283 BX469912.14 misc upstream 51871 12171295 ~ 12171591 (+)
XLOC_003290 FO904934.3 misc downstream 23930 12247688 ~ 12247984 (+)
XLOC_003291 FO904934.2 misc downstream 32673 12256431 ~ 12256727 (+)
XLOC_003292 CABZ01022564.1 misc downstream 68187 12291945 ~ 12292241 (+)
XLOC_003293 LO017719.3 misc downstream 93856 12317614 ~ 12317910 (+)
XLOC_003294 LO017719.1 misc downstream 102448 12326206 ~ 12326502 (+)
XLOC_003276 NA non-coding upstream 347332 11839827 ~ 11876130 (+)
XLOC_003275 NA non-coding upstream 352315 11833344 ~ 11871147 (+)
XLOC_003274 NA non-coding upstream 369016 11820364 ~ 11854446 (+)
XLOC_003322 NA non-coding downstream 558457 12782215 ~ 12785059 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
tiger barb (Puntius tetrazona) G82055 NA non-coding NC_056709.1 CM032078.1 15197912 ~ 15202535 (+)