XLOC_033086 (hemk1)


Basic Information

Item Value
gene id XLOC_033086
gene name hemk1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 41510135 ~ 41536323 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00064297
GATTCGACTCAATAGAACGATTCGAACACTCGCAGCACATGGTTGCCTTCAAGGACGAAAACATGCAGGTTACATTATTATCAGATATTTTGTAGCAGCTCagaatttagtttctttcttGATCAGTGTACAGTTCGGAGCGATGACTTTCAAGACCACTTGGTTTCTTCGCCGATGTATGCACAGAAAGAGTGGATTGTTAAAACAGAGGTGTGACGTTGTGCGGTTGTTGTGCTGTGGTAGTgcagcagagggcgctcttgcTCCACCGGCAGAGCGCAGCATCACAGCCGAGCGCGCGGTCGGTCTGTGGGCTCAACACTTCAGCCTGCACCGCATCTCGGAACCTCTACTCTCTAGTCAATACATCATATCTCATGTACTTGGCGAAAAAACTCTGGAATGTGTTCAGAAGAAAAGACTGCGAGACACCCTGACTgacaaagaaagagaaactgtGTGGAAATTGTGCTCAAAACGCCTAACAAGGATGCCTGTACAGTATGTGATTGAGGAATGGGACTTCAGAGACTTGACCTTGAAGATGAAGCCTCCTGTGTTCATACCCCGTCCCGAAACAGAGGAGCTGGTTGGTCTAGTTCTAGAGGACTTTGAGTCTATTCGGGGGGATTTTCATGGTCTGGAGGTGGGCTGTGGGTCTGGAGCCATTTCTCTTAGTTTACTACGCAGCCTTCCACAGCTCAGGGTATTTGCTTTGGATCAGAGCCAGGATGCTGTATGTCTAACAATGGAAAATGCAAACAGACTAGGTCTGCAGGACAGACTAGAGGTTCATCATTTAGATGTGGTTAAAGaCGCAGATGTGATCCTGAGCAAATGTAACCCTGTTGACTTTATTGTCAGCAACCCTCCCTACATACTCAGTCAGGACATGGAGGCTTTACAGACAGAGATATTCGGCTTTGAAGACCACGCTGCGCTGGACGGAGGGTCAGACGGCCTCTTTGTGATTCGTCCCATTCTGGCTCTGGCTTCCAAGCTCTTAACAAAACAAGGGCGGGTTTATCTGGAAGTTTCCTCATGTCATCCTCCAGTCATCCAGCAGCTGGTGATGGAGACCATGCCTGAGTTCATTTATCTGGAAAGCCGCTGTGACCTCAGTAACAGACCGAGATTCTGTATTTTACAGAAGAATGAAGAAAATGGCTGAAACCGAGGATTCAGAAATACAGTCAAGACAATTGTTTAACACAGCACAGGAGAACAAGAGATTTCAGCAGTTGCCCATTCAGAATGCCTTTAGCCAAATTGCATGTGGTACAGAGCCAGTCTCCTGCCAGTTTCCCAGCATGCAGCAAGCACAAAAACCTGCCAATCCTACCGAGAAGCTCCTTCCTTAAATCCACCTTCCACAGGTCTCTATTTGTTTTGTGCCACAACCTACTGCTGTTACAGCTTCGACGCTGACTTTCCTTTAAattggtaagtgtgtgtgtgtgttttgttgtggTGAGATTGCATTGATTGTGAGTATGTGCTCAGTGCGCAGTAAGTGTCAGGGTGCAGTAGGCTGAAGGTAATTATTGAGGCCTTTTCTAAGAACTCCCCCTCCCAGCCCTGCACTCGTCTCTCCCTGGAAGTAATGCGCTCATTCTGCGAAACAGCTGGCCCATTGCCTCTCGCAGCACGACGCTagcccacaaacacacacagaaagccTACAAATACTGACTGATAACCTGACATGCTCCATGGCTACGACGAATGCAAGATCAATCTGTGTAAACTGGAATGAAACAAGCATTAAACCCTGATCGAGTCATTTTGTATTTCTATAATACAcgacataa

Function

symbol description
hemk1 Predicted to enable nucleic acid binding activity and protein methyltransferase activity. Predicted to act upstream of or within protein methylation. Orthologous to human HEMK1 (HemK methyltransferase family member 1).

GO:

id name namespace
GO:0006479 protein methylation biological_process
GO:0032259 methylation biological_process
GO:0008168 methyltransferase activity molecular_function
GO:0003676 nucleic acid binding molecular_function
GO:0008276 protein methyltransferase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-050208-185 Predicted to enable nucleic acid binding activity and protein methyltransferase activity. Predicted to act upstream of or within protein methylation. Orthologous to human HEMK1 (HemK methyltransferase family member 1).

Ensembl:

ensembl_id ENSDARG00000078894

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00064297 True 1811 mRNA 0.47 11 41510135 41536323

Neighbor

gene id symbol gene type direction distance location
XLOC_033085 NA coding downstream 57247 41451670 ~ 41452888 (-)
XLOC_033084 synpr coding downstream 280348 41223204 ~ 41229787 (-)
XLOC_033083 slc6a22.1 coding downstream 371280 41118910 ~ 41138855 (-)
XLOC_033082 srsf3a coding downstream 418687 41080003 ~ 41091448 (-)
XLOC_033081 rab44 coding downstream 430926 41057943 ~ 41079209 (-)
XLOC_033087 cav3 coding upstream 459743 41996066 ~ 42003780 (-)
XLOC_033088 gpr61l coding upstream 495513 42031836 ~ 42036685 (-)
XLOC_033089 parp3 coding upstream 502035 42038358 ~ 42049350 (-)
XLOC_033090 grm2a coding upstream 515157 42051480 ~ 42112191 (-)
XLOC_033091 tex264a coding upstream 609303 42145626 ~ 42290259 (-)
XLOC_033077 NA non-coding downstream 541794 40963686 ~ 40968341 (-)
XLOC_033076 CR293534.1 non-coding downstream 563660 40946357 ~ 40946475 (-)
XLOC_033074 NA non-coding downstream 646057 40856139 ~ 40864078 (-)
XLOC_033070 CR450814.1 non-coding downstream 690369 40795898 ~ 40819766 (-)
XLOC_033102 NA non-coding upstream 1521139 43057462 ~ 43072882 (-)
XLOC_033106 BX927362.1 non-coding upstream 1810606 43346929 ~ 43349086 (-)
XLOC_033111 NA non-coding upstream 2443388 43979711 ~ 44002542 (-)
XLOC_033118 NA non-coding upstream 4387619 45923942 ~ 45929175 (-)
XLOC_033121 BX005101.1 non-coding upstream 4631694 46168017 ~ 46251940 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000340_10258762_10264352 NA coding CI01000340 null 10258553 ~ 10265625 (-)