XLOC_033106 (BX927362.1)


Basic Information

Item Value
gene id XLOC_033106
gene name BX927362.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 43346929 ~ 43349086 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00064339
TCGATAAAGGTTTCCATCTGACGTCATGAGCCTTGGTGATGGATGTCTCGCTTCTGACTGGATACACATCACTGTCAATTCTTTCAGTTGTACAACAGACAGCATACTTCTGAGGATGGCAACACCGTACAGCCGCCCACCACCACTGCACATCACCTGTGTTAAAGTGCACAGTAGCCAAAAGGCTTtgacatttattaaacatgaaaacaaaataattgttgaCACCTACAAAGTCACATCTTTATGTGCCCTTACGGATGGTGATGCAGTTTATCTGTCCATAAAAAACGGCAGTGACCCTGAATTTGAAGAGGGACACtcatatattgtaaaaaatgtaaccATCTCAAACAAATACGGCCGCCgatgtttatttgtaaataaaggcACCATCAAATTTAGGACGGCTCCGCTAGCCATAAGTGAGGAGGCTAAAAGAGCTGCAAGGGAGGCCCTCTGTCCTCATTCACGACCTATAACAGGAGAGGAAGAGGATATCTTCAGTGAAACTGGGTACCTGAGTCTACGGGGGCAGTTAGAAAAAG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000097469

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00064339 True 548 lncRNA 0.44 2 43346929 43349086

Neighbor

gene id symbol gene type direction distance location
XLOC_033104 si:dkey-178o16.4 coding downstream 125348 43218851 ~ 43221581 (-)
XLOC_033103 lrrn1 coding downstream 254754 43076516 ~ 43092175 (-)
XLOC_033102 NA coding downstream 274047 43057462 ~ 43072882 (-)
XLOC_033101 glyctk coding downstream 295036 43019642 ~ 43051893 (-)
XLOC_033100 si:ch73-361p23.3 coding downstream 339665 43001964 ~ 43007264 (-)
XLOC_033107 eevs coding upstream 88988 43438074 ~ 43449013 (-)
XLOC_033108 MDFIC2 coding upstream 142549 43491635 ~ 43498996 (-)
XLOC_033109 foxp1b coding upstream 253057 43602143 ~ 43890462 (-)
XLOC_033110 prok2 coding upstream 569443 43918529 ~ 43922813 (-)
XLOC_033111 NA coding upstream 630625 43979711 ~ 44002542 (-)
XLOC_033085 NA non-coding downstream 1894041 41451670 ~ 41452888 (-)
XLOC_033077 NA non-coding downstream 2378588 40963686 ~ 40968341 (-)
XLOC_033076 CR293534.1 non-coding downstream 2400454 40946357 ~ 40946475 (-)
XLOC_033074 NA non-coding downstream 2482851 40856139 ~ 40864078 (-)
XLOC_033118 NA non-coding upstream 2574856 45923942 ~ 45929175 (-)
XLOC_033121 BX005101.1 non-coding upstream 2818931 46168017 ~ 46251940 (-)
XLOC_033122 BX005101.2 non-coding upstream 2879031 46228117 ~ 46228232 (-)
XLOC_033123 CU041346.1 non-coding upstream 2945275 46294361 ~ 46310011 (-)

Expression


Co-expression Network