XLOC_033108 (MDFIC2)


Basic Information

Item Value
gene id XLOC_033108
gene name MDFIC2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 43491635 ~ 43498996 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00064341
GTCTGAGAGAAACGAAACGCTTCCCGTCGCTGTGAAGACAGTCATTTTTACATTTCTATAACTTTGTTAACATTTCCCTGCATATAGTCcgtttatttgtgttttgctgAGGCGTGTTGCGTTGCTCAAAACTCGAATGTGATGCATTCATACTGTCATCAGTAAGCTtatatcaatgacagatggacggacaaaAGTCGGAAATCGAGCTTGATTTGATCCAAACTGGAGAGAGAAGCTGTTTGGTAAAAGCTGTAACAGAGGTGTCCAGCACAGCACCTGGGAGACTCTCGCCCATTCCTGAGCTGGATCCCTGGGAGAGAGAAGCAGACACGGGCTCTACAGAACTGACTTACTCCTTATGCTCAGTGGACAGGTACAGCAGCGCCTCCTCCTCCAGCAGCTCTCTGTCTGAGTCCCAGGAGAGAGAAGAGCTCTGTGCTGGGATCGTGCTGAACTGTCTCTTCTGCCGTTTCTACGACATGTTCCTCATGCTACCTGAAACATGCGAGCGGGCTGCTAACTCCATCTGCCCAACCTACATGCATTTCTCACCACCTGTAGAACCTGCACACAACACCACCTGGAACTGCAGTTGTGATTTTGACTGTGGCCTTATGGACGCCTGCCATGAAACAGGGGAATGCCTTGAGCTAGCCATGGAAATTTCAGAGGTTTGCTTTCATTGAGGTGCCTGCAAATCTGAAGACATCATTGCGAGAACACTTCACAATTACAAGTCCCTTTGAGAGGGAAAAAGTTGCTACTTTTTATGCAAGAACTCTACTGTGTGTGTATGCAGGCTAATATATGCTCATTTGGAGCATGCTGTAAGTGCTTTTTGTGCAGCTCGTCCAATTTTTAATAGCTCGGCCCATTAACTCACATCAGTGATCAAAGTAGTAAAAAGTAGTAAAGTACAAAGTAGTAAAGAAG

Function

symbol description
mdfic2 Orthologous to human MDFIC2 (MyoD family inhibitor domain containing 2).

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000091832

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00064341 True 936 mRNA 0.46 4 43491635 43498996

Neighbor

gene id symbol gene type direction distance location
XLOC_033107 eevs coding downstream 42622 43438074 ~ 43449013 (-)
XLOC_033105 frmd4ba coding downstream 103715 43220191 ~ 43387920 (-)
XLOC_033106 BX927362.1 coding downstream 142549 43346929 ~ 43349086 (-)
XLOC_033104 si:dkey-178o16.4 coding downstream 270054 43218851 ~ 43221581 (-)
XLOC_033103 lrrn1 coding downstream 399460 43076516 ~ 43092175 (-)
XLOC_033109 foxp1b coding upstream 103147 43602143 ~ 43890462 (-)
XLOC_033110 prok2 coding upstream 419533 43918529 ~ 43922813 (-)
XLOC_033111 NA coding upstream 480715 43979711 ~ 44002542 (-)
XLOC_033112 rybpb coding upstream 507713 44006709 ~ 44044385 (-)
XLOC_033113 shq1 coding upstream 590193 44089189 ~ 44161262 (-)
XLOC_033102 NA non-coding downstream 418753 43057462 ~ 43072882 (-)
XLOC_033085 NA non-coding downstream 2038747 41451670 ~ 41452888 (-)
XLOC_033077 NA non-coding downstream 2523294 40963686 ~ 40968341 (-)
XLOC_033076 CR293534.1 non-coding downstream 2545160 40946357 ~ 40946475 (-)
XLOC_033118 NA non-coding upstream 2424946 45923942 ~ 45929175 (-)
XLOC_033121 BX005101.1 non-coding upstream 2669021 46168017 ~ 46251940 (-)
XLOC_033122 BX005101.2 non-coding upstream 2729121 46228117 ~ 46228232 (-)
XLOC_033123 CU041346.1 non-coding upstream 2795365 46294361 ~ 46310011 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000340_11219006_11225062 NA coding CI01000340 null 11218574 ~ 11225062 (-)