G1425419


Basic Information

Item Value
gene id G1425419
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 18319931 ~ 18326899 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1631959
TTTATTAAGATATTCAGATTGTTTTTCAGAATTTCTGTCTTTTTTACAGTAGTTAATGTGCAATTATCTTTATTACTGGGTCACAGTTAGGATTTCACAAAGTTATTGGCACTTGGAACACTGGCATGTACATGGGTAGGGATCAGGGTAACACGGCATGGGATAGGGTCGTGGGGAGGAGCATCATCAGTAGTATATCTCTGACAACACTGCATTAGGTTgtattttatatccaaaaaagctttatttattttatatttttagtctgggttattttttaaaacaataacTCATGCTGCAAGTGAACAACTAACAAACTTCAATAGTGCTTCTATGTGTTGTAAGAATGTACagtttaatatactgtatttatagtgTGAGAAGAAAGATCTGCAATGGGGAAAGACCGACGGCACCAGAGACAGGAAACCAAATCAAAAAGAGAGGCGTCATTCTCGGTTGCTGTCATATCTCTCTGTGTAACTGAGGTAATGACTTTCACAAAGCATCCCACTTCTCCAcagccaataccttgactgtatTCTATTCATTCCATGTCAACATGAGACTTGAGCTATTTTTATTGTTCTGGTCTGTCTGTACCTGAACTGTACTGTAGCCTAACGTCtcctgggtcgtattcattagggcgCACCGTAGCGAAACGCTTTGCAACGGggggggagaagaaaaaaaaccatGAGCGTCTCTTATTAGACAAGTTCATGCAGTCCCTCCCCGTTTTCAGTCCGTAATGAACACGACCCCGGTACTTATGAGGTTAGTAACGGTCTGAGGCTATGACCGACGGCATAGGAGGTAAACTATCTGTGTAGTTGTAAACACACATTAAACAGGACACTATCAGTGAGCTGCCATGccgtgtgtgtggtttgtgtatCTCTGGTGCGTCAGGGTCCTTATAAGGAGCGGTAATACTAGTAAATGTATCTCTGGAATAGACGTTTAGAAGATTGCTGTCAGTCAGCGGTTGCAGAGAAAAGCACAGATTGGAGCCAGACCTGGGATCAAATACTTCATCTGGGATTGATTGAGCACGCCTGGCTTAGTGGACCCAATACAATTGTCCTAAAACGGCATACACGGCCCATCAGACTCTCCAGGAGGGCTAGCGCTCCAAAGTATTTTAAAGATTTAAAAgacttgaacccaggtctgattttAACTGCAAGGAAACATACAAGGATTGACAGGCCACAATGCAAGCAGAAATGGCCATGTCCCTTACCACTGGTCTAAGGTCAGATCTTTCTTTATCCCCATTATGTTTAGAATTAGGATTGGTAATAGGGTAATCTGGTTCTAGAGCTGTGGTAAAGGGGTTAACGTCGACCTATAGCCTGCCATGCAGAGAGGGCCggttgggagggaggggaggggggctaCTATAGTAATAGAATGGCTTCCCACCCCCTCGCCTCCCTCTCCCGCAGAGAGGAGATGTACAGTCTGGTCACTAGGACCCAGGGTGTTACATGACCACGTGACCTGACCAGGGGGATAACCTCCCTACGCGTTGGTTGGTTGGGCACCACCCCCCAGAACctgcccggggggggggggggggggggtacagaaaCAACAAATGAAcaccaaataaaaatacaaaatgaaaaggAATAATAAAAAATACAGAAAGGAAACTACAAAACAATCCTCCTCAAAGAGTTGATtcccccccctcatccccacACCGATTCATTAGTAGACAGCGTAGCAAATCATTTCACAATGAAGAAAAACTACAGCttcctattggacaaattcaggtagtccCTCCACGCTTGTCAGTTTTCcaccgtttggtgcctaatgaacacaaccctggatCTATCGAAATAGAACGgacttggaacctctaaccccctcaaactcaactctggacctcgaagccagtttcCACTGAatgttttcattgttcccctctaaaaccagggactgatttagacctgggacaccaggtgtgtgcaattaatcattaggtagaacagaaaaccatcaGGCTCGGGAAcgcgtagggtcagagttgagtaCGGCTGCCTaacccattatgccatcattgacttgaatggggaggtCCGTTCTatagattctatttctatgcccgGATCACACTTCTGCCACCAAATACCACTCCACAGACCGTTCTAGAGGGACTAAATAGAGAGCGTGTTGACAAGGTGCCGAGGCTTTGGCTAGCGGTCTCTACTATACCGGACCGTTAGCGCTCACCCAAAGGTGCTTCAGTAAAGATTATTTCACCCTCTCTATTTCCCTTTTATTTGTCTGCGGTGCCGAGTGGAACCAGGTAGCGACAAGAAGCAACCCAGTGAGCACCAGACATTGAAATGGCGTATTGTCAACGTCTTGGGAAGACAGACGGGTAGATACATGGACATGACAAAGACAAGAAGCAATGTATTCCTGTCAGGATATAGGCTATGAATGAGTCGTAACTTGGGGCTGTGTACAGGCTCCAGCAGAGCTTACGTTAGCTATGGGGATCAACGGACTAAATATTTGGTCTCAAACACAATGGGGACTTCATCCCCAAAGCAAATACTGACAGGTCTTTTTGAATGTAGAATGAATGAATACAAGACAAGTCGAGACAGAAAGCAAAGCTCAACCACTGTCTCACTGATGTAACATTACGCTGCCCTCTATCGGTAGGATGATGGTAATGTCAGGCAGCGCAAGaagtcccccctccccccctgagTTGGAGTACCAACACCAGACACCAGGTGGGCGAGCACCTTATGAGCATCACAATCCAGCTATTCTCTTGTGGACAGACAGTTTTAGGCAATAATGTTACTTCTGGGTAACCGAGATCACAATCCAGCCAACATTTCCCTGGCTGGGACAGTTGTCATTCtataccatttagcagatgcttttatccaaagcgatttacagtcatgcgtgcatacattttacgtatgggtggtcccgggaattgaacccactatcctggcgttgcaagcgccatgctctaacAACTGAGCTGGATCACATGAGACGAGAGCCAAGCATGGTCAAGTGAAGGCGGAAGCTAATTTAACTTCCAGGGAATTCTGGATTTCAAAGAAATGTACAAGAACATAAAAAACAATGTCTGATTGATATTATAAATGGTTATTCCTAGTAAGGAATTTAAGAGATATAGTCCCTTAGGAGAGACTGACATACCAGCTAGTGGGGCTTCTACAGTCCATCATCCGTCGGTCTGTAAACCAACCAACCCTGTCTCCCTCCCAAAAGTACACAATGCAGTTTCAGTACTGTGTTCCCCCTTTTCGTGTCCAGCATCAAAACTGCCCCCTCCCCTTCATTACAGCACAATGCAAAAATATGTGGATCTCTTTCTCTAGCTATTTTACACTTTCAGAGTTCGACTTCCTCTTAATGACAGAACACTTGGCAAGTTTCTAAAACGTGTTAATGTTTGAATTAGTAATCAGGACCTAAAAAACACTACATAGTACATAGCTTCTCTTAGCAACACTAGTATTTACACACTAGCGTTGCTAGGAATTAGCTTGCAAAAAAACAGAATAGTCAGCTGGAAGACAGGAGTGAAATAAAACTCTGCCGATTGTCTGTAGAGTTGGTCCTTATGCAGGGGGGAAATTAAGCAAGTAACATTTAGTAGAACAGAACTTAAACCCTGTCCAAACGTGGGTCTGTCGTCCCACTTCCTCTCTGCTTTGCTCGCGTCAAGATAAAAGTCTGGCACGTGCGCCATACCTGCACAAAAAAGCAAGAGCTTGcgagggacttttattttgacatgAGGTAAACAGAGAGGAACTGAAGTCCCGGAGGAACTGCATGGGGTCTACAAACAGACCGTTAATTATACGTCCCATTCTATGTTCTTTCTCCATTTCCCCCCTGAATAAAGACCAACCCGACGGACAAAGTTGAAATTGAATTTGACTTCTGGCTTCCGGTGGACTATTCCGGTGTTTTTTGCAAGCTAATTCCTAGCAAGGATATTGTGTGAATACTAGCGTAGGTAAAAGCAGCTATACAGTACACATTTAAATCTGTAGAAATAAAAACATTGGTAAGTATCAACAGAAAAACAGCAACGTAATAACAACATTTCCTACAAAGCTCTTTTCTAAAATATGGTCTCtagtattttttaaatgtcatttCTGGCCCCGCGAAACAACTTCCAGCCGCATTTAGAAATGGTGTGCTTGGCCAGTGTTCCTACAGGATCCCTCACTCACTCGTCCTCCTTCCCCCcgttctcctgtcccctctctcagTAGCATTGGACTTGATAaaagtcatttaaaaaaagacaAACATGGTtctatcccaaatggcatcctattcctaatttagtgcactacttttgaccagggtccatagggctctggtcaaaagtagtgcaatatttttttagggaatagggtgccatttggaacgtagaCTTGATTTCCAGGCTAGGAGGCCAGGGGTGTCTGTGGTaacgtcccaaaatggcaccctattcccaatatagtgcactacttttggtcagAGTCCTATGGGATGCcatatgggccctagtcaaaagtagtacagGTAATAGGGGATTGATTTCAGCTCTGCTATAATGAAACAGTCTGGATTTCCAGGCTGTCTGCCTGACGACTCACTACATACTTCAGTCAGGCAGCCAGCGTTGAAGTCGGTTGTGGTGACATCACAATGAGGGGTGTTGTGCAAAACAAAAGTCATTACCGATTGGAGCATCTCGAACCAATCAGAGTAAGCCAATGACACATTTTGAAAACGCAgctttacccacgtgtgttctggctctggcccaacccatcgctTTCTGGGACCAATCACAACTGTTTGAATGTGTTTGCGTTCTAGAAATCGTCAGATCCATGTTGTAGCGTTTGGCCGGAGCAAGGAGCCTGGGTAGGCAGGAAAAGGCTACGTCACCCCGCCCCTTACATTAAGAAACAACTAAATATTTATCTTTGTTGCAAAAAGGCCATGGGACGAGCATCTTCTCCCTCTCAGCTGTCTTGACTGCAGTTAAGTACCAGAGGCCTGCCACAATGCTTCCTACGTCCTCAGACTCTAAACAAGCAGGAAGAAAGAGTAGCAccacacccccctcccctccatccataAGAGTTAGGGTAACAACCATGTATCTAGGAACGTATAGAATAGCGCCCCCCCCCTCCATCCGTAAGAGTTAGGGTAACAACCATGTATCTAGGAACGTATAGAATAgcaccactgtctctctcccttcctcccaactccctcccatcttcCCGCTCAAGTCTAGGGATTTCACATAAAAATAAAGTCAGTCAACTTGGAATAACAACAATCTTATTAGTATAAACATCTAAAATGGACTGTGTCTCACTGTATTAATATTTAGATAGAGAGACCACCGACAGGGAAATGTATACCACCATCTTCAACATCATCCTAGTCTTAGTCATCACTGCACTTTTATAAAACAGACCCATTGTCAGCCTGCAGTCTCCTGAAGGGAATGGACGCCTGGTTGGTTGGTTAGACACATGCATTGCCCGATGCAgagacatatatacagtaccagtcaaaagtttggacacacctactcattcaagagtttccttcaagattgttggaaaaagcattccaggtgaagctggttgagcgaatgccaagagtgtgcctaactgtcatcaaggcaaagggtggctatttgaagaatctcaaatatatatttgatttgtttaacactttttttggttactacatgattccatatgtgttatttcatagttctgatgtcttcactattattctacaaataaGGAAAAGCCCTGGAATGAGGAGGAgtctttttgactggtactgtatatacacacacacgcacacagactgtCACACCAGCACACAGGCAAAAAAGGACACACCTGGACCGACACACACACCAAGTCATCCTATCAGGCAGTCCGATCTGTGGTTTAGACAGTTACCACACCAAACAGCCCCCTTCCCCCTGCCAAACAAACATTCACTCTTACACACCAGTCATTCACATACACAACACGGCCGCCATTTTCAGACATTTAGCTTGCATcctaaacggcaccctattccctacattggcTCTGTCCCAAAGGAAGTGGTGCACTTAGACCTGGGTCATAAAGTGGAGGCTGAATTGAATCAGAATAAAGTGAAGCAGTGAAGCTGAATGAGATCAGGACTCTGAATGGGATTTAATGGTTTGTTTAGTGAACAGTTTGATGCTGTCCCCTCCCTCCCAGCCAGTGTTTCATCTATATTCATTTAGCAGAGGTGGCCCACCACTCCTACATTATTGCCACAgaggcaaaatatatatatatatatatttttttatatatatattcctgCAAGACGTGCTTTTAAATGGACAGTTGTTggctcaatgactggaagtctatgggaacagctagcatgtcattgtgctaatgctagtagcaatgctgtgtgtgtgtctataggcttccttcctctccagactgtagtactgtaggtctctcctactgagtcagacacaaacaaacagtctcctctcattctctaccgccgcacataccacacacacacacacacactactggcaGAGCCGCGTACCcaaaccacccacacacaccaacaggaCATGCGCATTCGCCACTCCaaaacccagacacacacacgtatgcaacACATAGAACCAGACGCAGACTCACTCACCCTGGCACAGACATGCGCAttccacacacacgcactctctctgtcttccagtCAAAGGCGTTAGCGTGAAGAGCTAGAACTTAACACGCATGACTCCATATATGGCAGCAGAGAGAAATGGGGAAAAACTGCACACACCAGCACGCATGCATGCCTTTATACAGAGCCAACCAAgcatcccatcctccctccctc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1631959 True 6969 TUCP 0.45 1 18319931 18326899

Neighbor

gene id symbol gene type direction distance location
LOC118936554 trmt1 coding downstream 16047 18275795 ~ 18303884 (-)
LOC118940346 LOC106593718 coding downstream 80122 18219359 ~ 18239809 (-)
LOC118940345 LOC106590757 coding downstream 390076 17920221 ~ 17929855 (-)
LOC118940344 LOC106590712 coding downstream 592289 17723278 ~ 17727642 (-)
LOC110526262 LOC106590884 coding downstream 1018734 17296873 ~ 17301197 (-)
LOC110511293 LOC106590640 coding upstream 761 18327660 ~ 18346508 (-)
LOC110487190 LOC106564382 coding upstream 34826 18359593 ~ 18494120 (-)
LOC118940348 NA coding upstream 237435 18564334 ~ 18707126 (-)
LOC110485574 LOC106564445 coding upstream 386330 18713229 ~ 18716461 (-)
LOC118940349 LOC106590535 coding upstream 394059 18720958 ~ 18721917 (-)
G1425433 NA non-coding downstream 905 18316374 ~ 18319026 (-)
G1425432 LOC106593677 non-coding downstream 56939 18261461 ~ 18262992 (-)
G1425531 LOC106593677 non-coding downstream 65717 18253691 ~ 18254214 (-)
G1425525 NA non-coding downstream 84372 18235153 ~ 18235559 (-)
G1425553 NA non-coding upstream 26908 18353807 ~ 18354086 (-)
G1425557 NA non-coding upstream 43208 18370107 ~ 18371945 (-)
G1425437 NA non-coding upstream 60031 18386930 ~ 18388155 (-)
G1425583 NA non-coding upstream 147807 18474706 ~ 18475648 (-)
G1425321 NA other downstream 408555 17909065 ~ 17911376 (-)
G1424547 NA other downstream 862427 17456929 ~ 17457504 (-)
LOC110494935 LOC106590780 other downstream 1351576 16939303 ~ 16968595 (-)
G1424218 NA other downstream 1381232 16855477 ~ 16938699 (-)
G1424227 NA other downstream 1468445 16850751 ~ 16851486 (-)
G1425652 NA other upstream 298857 18625756 ~ 18627041 (-)
G1425753 NA other upstream 539291 18866190 ~ 18866932 (-)
LOC110485549 LOC106564452 other upstream 726975 19050725 ~ 19093965 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_003554 NA non-coding NC_007122.7 CM002895.2 31204986 ~ 31212769 (+)
bowfin (Amia calva) G48699 NA non-coding CM030126.1 CM030126.1 222089 ~ 223255 (-)