G1456539


Basic Information

Item Value
gene id G1456539
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 47199377 ~ 47199585 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1666399
GATAACGACATTGAGCCTTTTTCAAAAAATGGTTTTATGAGATAGGAGAACACGTTGGgaaggatcttagaccattcctccatacagaatctttccagatcattgatatccttcgtctgctCTTATGGACTttcctcttcaattcaaaccacaggttttcaatgaggTTCAAGTCTAGAGACAGATGTCCAATGCGAAATGTTGATTTT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1666399 True 209 lncRNA 0.38 1 47199377 47199585

Neighbor

gene id symbol gene type direction distance location
LOC110493981 cytl1 coding upstream 62507 47135164 ~ 47136870 (+)
LOC110493980 LOC106565205 coding upstream 64792 47109723 ~ 47134585 (+)
LOC110493976 plxna1 coding upstream 397175 46512678 ~ 46802202 (+)
LOC110493975 chchd6 coding upstream 762851 46376260 ~ 46436526 (+)
tpra1 tpra1 coding upstream 823390 46363032 ~ 46375987 (+)
LOC110493983 LOC106565202 coding downstream 87342 47286927 ~ 47308189 (+)
lyar lyar coding downstream 128717 47328302 ~ 47341231 (+)
LOC110493987 LOC106565200 coding downstream 152647 47352232 ~ 47361786 (+)
otop1 LOC106565199 coding downstream 165486 47365071 ~ 47372581 (+)
LOC110493989 LOC106565315 coding downstream 175051 47374636 ~ 47376700 (+)
G1456293 NA non-coding upstream 100212 47098965 ~ 47099165 (+)
G1456291 NA non-coding upstream 102911 47096244 ~ 47096466 (+)
G1456290 NA non-coding upstream 104032 47095139 ~ 47095345 (+)
G1456287 NA non-coding upstream 109166 47089919 ~ 47090211 (+)
G1456286 NA non-coding upstream 113785 47083967 ~ 47085592 (+)
G1456597 NA non-coding downstream 47291 47246876 ~ 47247152 (+)
G1456668 NA non-coding downstream 173104 47372689 ~ 47372813 (+)
G1456670 NA non-coding downstream 177197 47376782 ~ 47378517 (+)
G1456699 NA non-coding downstream 215027 47414612 ~ 47415612 (+)
G1454824 NA other upstream 1340876 45856249 ~ 45858501 (+)
G1454127 NA other upstream 1862854 45335294 ~ 45336523 (+)
G1454049 NA other upstream 1939806 45258475 ~ 45259571 (+)
G1453914 NA other upstream 2128452 45069971 ~ 45070925 (+)
G1453889 NA other upstream 2148372 45050729 ~ 45051005 (+)
G1456570 NA other downstream 28634 47228219 ~ 47228796 (+)
LOC100135862 LOC106565314 other downstream 605773 47805358 ~ 47807518 (+)
G1456969 NA other downstream 633995 47833580 ~ 47839370 (+)
glrx LOC106565191 other downstream 831329 48030892 ~ 48036585 (+)
LOC110494013 LOC106565177 other downstream 1189497 48389082 ~ 48424478 (+)

Expression


Co-expression Network