G1467170


Basic Information

Item Value
gene id G1467170
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 57428489 ~ 57429134 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1678144
gagccctaggaccatgccccaggactacctgacatgatgactccttgctgtccccagtccacctgactgtgctgctgctccagtttcaactgttctgccttattattattcgaccatgctggtcatttatgaacatttgaacatcttgaccatgttttgttataatctccacctggcacagccagaagaggactggccaccccacatagcctggttcctctctaggtttcttcctaggttttggcctttctagggagtttttcctagccaccgtgcttctacacctgcattgcttgctgtttggggttttaggctgggtttctgtacagcactttgagatatcagctgatgtacgaagggctatataaatacatttgatttgatttgatttgat

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1678144 True 394 lncRNA 0.46 2 57428489 57429134

Neighbor

gene id symbol gene type direction distance location
tegt LOC100196653 coding upstream 98762 57305804 ~ 57329727 (+)
LOC110494190 LOC106565431 coding upstream 123938 57275277 ~ 57304551 (+)
LOC110494189 LOC106565429 coding upstream 154488 57238260 ~ 57274001 (+)
nramp-alpha nramp-alpha coding upstream 202803 57176451 ~ 57225686 (+)
nelfcd nelfd coding upstream 316927 57105818 ~ 57111562 (+)
LOC110493228 LOC106583273 coding downstream 39619 57468753 ~ 57474567 (+)
LOC110494206 LOC108254821 coding downstream 69171 57498305 ~ 57548178 (+)
LOC110494197 LOC106565496 coding downstream 226815 57655949 ~ 57665568 (+)
LOC110494203 LOC106565438 coding downstream 254711 57683845 ~ 57688188 (+)
LOC110494205 LOC106565438 coding downstream 265042 57694176 ~ 57697563 (+)
G1467138 NA non-coding upstream 46091 57382170 ~ 57382398 (+)
G1467136 NA non-coding upstream 51306 57376963 ~ 57377183 (+)
G1467134 NA non-coding upstream 52323 57375924 ~ 57376166 (+)
G1467127 NA non-coding upstream 65440 57362763 ~ 57363049 (+)
G1467126 LOC106565432 non-coding upstream 67107 57361122 ~ 57361382 (+)
G1467180 NA non-coding downstream 12316 57441450 ~ 57441664 (+)
G1467198 NA non-coding downstream 33845 57462979 ~ 57463183 (+)
G1467200 NA non-coding downstream 35166 57464300 ~ 57464584 (+)
G1467206 NA non-coding downstream 43954 57473088 ~ 57473322 (+)
G1467031 NA other upstream 278146 57149303 ~ 57150343 (+)
G1467030 NA other upstream 280748 57146488 ~ 57147741 (+)
G1467020 NA other upstream 309603 57117702 ~ 57118886 (+)
LOC110494160 LOC105017078 other upstream 845768 56575737 ~ 56584088 (+)
G1466224 gem other upstream 1207543 56219242 ~ 56220946 (+)
G1467159 LOC106565433 other downstream 49663 57478797 ~ 57554480 (+)
G1467219 NA other downstream 160731 57589865 ~ 57614300 (+)
G1469076 NA other downstream 1078163 58507297 ~ 58507885 (+)
G1470607 NA other downstream 2672758 60101892 ~ 60104007 (+)

Expression


Co-expression Network