G1469749


Basic Information

Item Value
gene id G1469749
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 59112540 ~ 59112759 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1681077
GACAGTGAGtcccagctagcaatgaggaattGGCCCAGAAGTGGCCCTCTTCCAGGGAgccggaactgattgaatcgaCCCGGAATCGGGTGTCGGACTCGGCCAAAATGAATAACTGTCCAGAATCGGCCCAAGTACATCGGGCCGTTTCCGTCCACCGGAATTCAGCCGACTTTGCCAGCATCTTACCAGAATCCCCCCAGAAGCGACCCGATgctaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1681077 True 220 lncRNA 0.56 1 59112540 59112759

Neighbor

gene id symbol gene type direction distance location
LOC110494239 LOC106565466 coding upstream 101461 58832894 ~ 59011079 (+)
LOC110494238 LOC106565465 coding upstream 384326 58716072 ~ 58728214 (+)
LOC110494235 LOC106565463 coding upstream 405346 58696691 ~ 58707194 (+)
trnar-ucu-6 NA coding upstream 766876 58345575 ~ 58345664 (+)
LOC110494225 NA coding upstream 803520 58305759 ~ 58309020 (+)
LOC100136832 lrrn1 coding downstream 97918 59210677 ~ 59245106 (+)
LOC110494244 NA coding downstream 145720 59258342 ~ 59266492 (+)
LOC110494246 LOC106565476 coding downstream 170040 59282799 ~ 59438025 (+)
LOC110494249 LOC106565477 coding downstream 348555 59461314 ~ 59465333 (+)
LOC118940562 NA coding downstream 404821 59517580 ~ 59517708 (+)
G1469415 NA non-coding upstream 26104 59086047 ~ 59086436 (+)
G1469411 NA non-coding upstream 28101 59084225 ~ 59084439 (+)
G1469409 NA non-coding upstream 32566 59079569 ~ 59079974 (+)
G1469408 NA non-coding upstream 41307 59070514 ~ 59071233 (+)
G1469407 NA non-coding upstream 42402 59069929 ~ 59070138 (+)
G1469761 NA non-coding downstream 4526 59117285 ~ 59117535 (+)
G1469849 LOC106565475 non-coding downstream 134382 59247141 ~ 59247611 (+)
G1469850 NA non-coding downstream 135506 59248265 ~ 59248549 (+)
G1469851 NA non-coding downstream 136446 59249205 ~ 59249504 (+)
G1469076 NA other upstream 604655 58507297 ~ 58507885 (+)
G1467219 NA other upstream 1498240 57589865 ~ 57614300 (+)
LOC110494206 LOC108254821 other upstream 1564362 57498305 ~ 57548178 (+)
G1467159 LOC106565433 other upstream 1628951 57478797 ~ 57554480 (+)
G1467031 NA other upstream 1962197 57149303 ~ 57150343 (+)
G1470607 NA other downstream 989133 60101892 ~ 60104007 (+)
G1471723 LOC100380707 other downstream 1859719 60972478 ~ 60999063 (+)
LOC110494283 LOC106565563 other downstream 2443560 61555873 ~ 61558328 (+)
G1473171 LOC106581772 other downstream 3585744 62698503 ~ 62698815 (+)
G1473177 NA other downstream 3597580 62710339 ~ 62711136 (+)

Expression


Co-expression Network