Gene
RNA
| Item | Value |
|---|---|
| gene id | G1473911 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 62826785 ~ 62827217 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1685631 | True | 433 | lncRNA | 0.32 | 1 | 62826785 | 62827217 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110494322 | LOC106565525 | coding | upstream | 14561 | 62807657 ~ 62812224 (+) |
| c1galt1b | LOC106565526 | coding | upstream | 52344 | 62763482 ~ 62774441 (+) |
| LOC110493236 | LOC106583228 | coding | upstream | 66620 | 62747771 ~ 62760165 (+) |
| LOC110494319 | LOC106565529 | coding | upstream | 177260 | 62575985 ~ 62649525 (+) |
| LOC100136666 | LOC100136666 | coding | upstream | 298146 | 62506856 ~ 62528639 (+) |
| tsfm | LOC106565519 | coding | downstream | 129507 | 62956724 ~ 62958969 (+) |
| myl6 | LOC106565518 | coding | downstream | 132872 | 62960089 ~ 62968544 (+) |
| pfkmb | LOC106565515 | coding | downstream | 277378 | 63104595 ~ 63121550 (+) |
| itgb7 | LOC106583060 | coding | downstream | 297671 | 63124888 ~ 63141041 (+) |
| espl1 | espl1 | coding | downstream | 331846 | 63159063 ~ 63188421 (+) |
| G1473953 | NA | non-coding | upstream | 4015 | 62822556 ~ 62822770 (+) |
| G1473950 | NA | non-coding | upstream | 5555 | 62821015 ~ 62821230 (+) |
| G1473948 | NA | non-coding | upstream | 11497 | 62815001 ~ 62815288 (+) |
| G1473947 | NA | non-coding | upstream | 11877 | 62814582 ~ 62814908 (+) |
| G1473945 | NA | non-coding | upstream | 21769 | 62804794 ~ 62805016 (+) |
| G1473957 | NA | non-coding | downstream | 32945 | 62860162 ~ 62860455 (+) |
| G1473960 | NA | non-coding | downstream | 40610 | 62867827 ~ 62868255 (+) |
| G1473967 | NA | non-coding | downstream | 54806 | 62882023 ~ 62882250 (+) |
| G1473981 | NA | non-coding | downstream | 69939 | 62897156 ~ 62897547 (+) |
| G1473985 | NA | non-coding | downstream | 77675 | 62904892 ~ 62905356 (+) |
| G1473177 | NA | other | upstream | 115649 | 62710339 ~ 62711136 (+) |
| G1473171 | LOC106581772 | other | upstream | 127970 | 62698503 ~ 62698815 (+) |
| LOC110494283 | LOC106565563 | other | upstream | 1269747 | 61555873 ~ 61558328 (+) |
| G1471723 | LOC100380707 | other | upstream | 1827722 | 60972478 ~ 60999063 (+) |
| G1470607 | NA | other | upstream | 2722778 | 60101892 ~ 60104007 (+) |
| G1474159 | NA | other | downstream | 389731 | 63216948 ~ 63217594 (+) |
| srsf3b | LOC106565658 | other | downstream | 831227 | 63658373 ~ 63663255 (+) |
| tmcc2 | LOC106565656 | other | downstream | 856873 | 63684043 ~ 63691033 (+) |
| G1475820 | NA | other | downstream | 1736157 | 64563374 ~ 64565146 (+) |
| LOC110494386 | LOC106565630 | other | downstream | 1781037 | 64608194 ~ 64625111 (+) |
