G1474852


Basic Information

Item Value
gene id G1474852
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 63732885 ~ 63733103 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1686702
ATCAATACCTAATTCACTGTTTGTCACAGAAACATCAAACTAgatatgatttattctataaatgtctagcatACTTTTACAGCCTTTGTTTTGAGGAAAGAGTCCAGTTTTGATTTTACAGAGGGCATGAAGTCCGTCTAGAGGGTGTGTGGTCAAAGTTCTAACTAGTCTGTTATTGTAACGTCTGTCGTtcgaatgagaccaaggtgcagcgtggta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1686702 True 219 lncRNA 0.38 1 63732885 63733103

Neighbor

gene id symbol gene type direction distance location
bysl bysl coding upstream 27285 63702078 ~ 63705600 (+)
tmcc2 LOC106565656 coding upstream 41852 63684043 ~ 63691033 (+)
cdkn1a LOC106565657 coding upstream 61451 63665848 ~ 63671434 (+)
srsf3b LOC106565658 coding upstream 69630 63658373 ~ 63663255 (+)
LOC118940486 NA coding upstream 152296 63574560 ~ 63580589 (+)
dstyk LOC106565654 coding downstream 7259 63740362 ~ 63779877 (+)
LOC110494364 LOC106565650 coding downstream 145136 63878239 ~ 63883527 (+)
nbl1 nbl1 coding downstream 159895 63892998 ~ 63903875 (+)
LOC110494366 LOC106565648 coding downstream 175937 63909040 ~ 63919556 (+)
LOC110494367 LOC106565647 coding downstream 310052 64043155 ~ 64052786 (+)
G1474849 NA non-coding upstream 2972 63729680 ~ 63729913 (+)
G1474846 NA non-coding upstream 7046 63725621 ~ 63725839 (+)
G1474835 NA non-coding upstream 22925 63709696 ~ 63709960 (+)
G1474833 NA non-coding upstream 23761 63708892 ~ 63709124 (+)
G1474827 NA non-coding upstream 38331 63691804 ~ 63694554 (+)
G1474855 NA non-coding downstream 2841 63735944 ~ 63736480 (+)
G1474858 NA non-coding downstream 47486 63780589 ~ 63782929 (+)
G1474977 NA non-coding downstream 211016 63944119 ~ 63951085 (+)
G1474159 NA other upstream 515291 63216948 ~ 63217594 (+)
G1473177 NA other upstream 1021749 62710339 ~ 62711136 (+)
G1473171 LOC106581772 other upstream 1034070 62698503 ~ 62698815 (+)
G1475820 NA other downstream 830271 64563374 ~ 64565146 (+)
LOC110494386 LOC106565630 other downstream 875151 64608194 ~ 64625111 (+)
LOC110494389 NA other downstream 1022218 64755321 ~ 64780475 (+)
G1476510 NA other downstream 1570314 65303417 ~ 65304128 (+)
G1476520 NA other downstream 1592774 65325877 ~ 65327163 (+)

Expression


Co-expression Network