XLOC_033992 (BX005396.4)


Basic Information

Item Value
gene id XLOC_033992
gene name BX005396.4
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007118.7
NCBI id CM002891.2
chromosome length 74282399
location 43466635 ~ 43468412 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00066545
gtgCCATGGCACAttagctatttacatggcggactttgatTCCTGTTGCTAAGGAATGTGTGGTTATATTTCAGCAAGTGTGAAGCATGGAAGCTGCAGAAGTGATAAGGTGTTGGGTGGTGTCCATGTGCACTCACCAATTCAAACCCTGAAGAGTCAGCTGACAAATTCCATCGCTTCTCTTGACCATCTTGGCTTTGATGTCATATCATCTCTGCCCAAAGCTCTTCTGCTCTCACACCTCAGATGCCTCAGTGAATGCTGGCGAGGGCAACTTGAAAGCTTGAGGTGATAGAGAGAGACAGTGGTAGCTGCCGAACAGTGCTACTGACTTAAGCACAATCTCAAGAGCCTTCCTGTCAAATTGTACCATGCTGTCggagggaaaataaaaaaaataaaaaataaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000101658

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00066545 True 409 lncRNA 0.45 2 43466635 43468412

Neighbor

gene id symbol gene type direction distance location
XLOC_033991 NA coding upstream 58899 43406636 ~ 43407736 (+)
XLOC_033990 NA coding upstream 228263 43227735 ~ 43238372 (+)
XLOC_033989 BX284696.1 coding upstream 527372 42935126 ~ 42939263 (+)
XLOC_033988 BX284620.1 coding upstream 688521 42778000 ~ 42778114 (+)
XLOC_033987 BX470088.1 coding upstream 746116 42720405 ~ 42720519 (+)
XLOC_033993 BX005396.1 coding downstream 21482 43489894 ~ 43490751 (+)
XLOC_033994 NA coding downstream 214528 43682940 ~ 43684394 (+)
XLOC_033995 CT025913.1 coding downstream 388779 43857191 ~ 43859024 (+)
XLOC_033996 NA coding downstream 463798 43932210 ~ 44110681 (+)
XLOC_033997 NA coding downstream 888367 44356779 ~ 44377360 (+)
XLOC_033985 NA non-coding upstream 616923 42552186 ~ 42849712 (+)

Expression


Co-expression Network