XLOC_003441 (FP102969.1)


Basic Information

Item Value
gene id XLOC_003441
gene name FP102969.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 24116083 ~ 24151217 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00006722
aatcacaccagtgtgattagaCCTTTCAGTGTGTTACATGATCAGACACTAAACTGAAATCTTCTTTCCCATGATGTCTCGCACTGAACCAGAGAAAGACATATGCAGTGCTTGTCAGAAGTCACAatttatcagtgttttcaaactaatATTATTTGGGTTCAGACATTTCAATACACATATAATAAATTGCACAAAGATCATGTTTATGgtttgtaaaatatatgctgatgTCTATAGAGatgacaaaaataattattttagacaTAACAAGACGTTcagaatgaactgcctgCCCATCACCCAtcatagataaaataataatactatcattaataaaccatttaaagGACCATACACATGTTCCTACACATATCTGACAATCATAGTATCAGATATTTCACAACATAATTAGGACATTTGTCAATATTTGGAGCATAGGTGAAAAGAAACTAAATATGATAAATGCATAGATAATTGAGGCTTTATTGTAACATCAAAAAGAAGATATGTCaacaggggtctcaaactcaatttacctgggggccgcaggaggcaaagtctgggtgaggctgggccgcataaggtatttcacaaaaaaaaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000101412

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00006722 True 604 lncRNA 0.34 3 24116083 24151217

Neighbor

gene id symbol gene type direction distance location
XLOC_003440 NA coding upstream 32495 24061156 ~ 24083588 (+)
XLOC_003439 maf1 coding upstream 59474 24046179 ~ 24056609 (+)
XLOC_003438 zc3h11a coding upstream 71497 24034345 ~ 24044586 (+)
XLOC_003437 ovgp1 coding upstream 83893 24027715 ~ 24032190 (+)
XLOC_003436 NA coding upstream 91507 24015835 ~ 24024576 (+)
XLOC_003443 NA coding downstream 25201 24176418 ~ 24177651 (+)
XLOC_003444 AL831791.1 coding downstream 27606 24178823 ~ 24178938 (+)
XLOC_003445 rem1 coding downstream 162714 24313931 ~ 24332052 (+)
XLOC_003446 rbm39a coding downstream 188145 24339362 ~ 24356093 (+)
XLOC_003447 BX072564.1 coding downstream 429362 24580579 ~ 24581114 (+)
XLOC_003369 CR854846.2 misc upstream 7993001 16122786 ~ 16123082 (+)
XLOC_003318 CR450764.6 misc upstream 11404087 12711700 ~ 12711996 (+)
XLOC_003317 CR450764.16 misc upstream 11421820 12693967 ~ 12694263 (+)
XLOC_003316 CR450764.11 misc upstream 11430484 12685304 ~ 12685599 (+)
XLOC_003315 CR450764.18 misc upstream 11436055 12679732 ~ 12680028 (+)
XLOC_003432 NA non-coding upstream 202584 23895529 ~ 23913499 (+)
XLOC_003430 NA non-coding upstream 518412 23594349 ~ 23597671 (+)
XLOC_003428 BX571675.1 non-coding upstream 718698 23397270 ~ 23397385 (+)
XLOC_003463 NA non-coding downstream 908245 25059462 ~ 25060098 (+)
XLOC_003466 NA non-coding downstream 1030640 25181857 ~ 25228195 (+)

Expression


Co-expression Network