XLOC_003449 (gpr25)


Basic Information

Item Value
gene id XLOC_003449
gene name gpr25
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 24703108 ~ 24704437 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00006751
AGCACAGAGATGGCACACTCTGGAATTACAATGAGCTTGACAAGTGAATATGACTATGACTATCCAATAAATTCCACGGACGAGAATCCAATCTACACCCTTCCCGATGCTGAACTGCTGCCCATGTCTAACATCTACATTCCTGTGCTGTACATCATTATGTTCCTCACCGGCTCTTTGGGAAACCTGTTTGTGATTGTGGTCATTGGAAAGCGGCGCAAGAAAAGTGGACGCCTGGTGGACACCTTCGTGCTGAACCTGGCACTAGCCGACCTCGTGTTTGTTCTCACGCTGCCAATGTGGGCAATTTCGACCCGTTATGACGAGTGGCCCTTTGGTGAGGTGTTATGCAAGATTAGCAGCTTTATCATTGCGGTTAACCGCTTTTCCAACATCTTCTTCCTCACCTGCATGAGCGTGGACCGCTACCTGGCAGTGGTGCGCCTAATGGACTCTCGGTTTCTCCGCAGCAGCAATTGTGCACAAATAACCTGTGGCATCGTGTGGGTGGTTTCCTTCTTTCTAGGATCTCCATCTCTGGCGTACCGTCACTTGATCAACAATTCGGTGTGCTCTGAAGATTCCAAATCCTCTTTTGTTCAAGGAATGAATCTTCTGACTATATTGCTAACCTTCTTGCTCCCGGTACTCATTCTAGGCCTCTGTTATGGGTCGATTTTGGTCAACCTGCGACGTCACTGTCACAATCCTGCCAACACACGCACTGATGCCAGACGAAGGCATTCGGTTAAGATTGTGTTTGCTATCATTTCAGCCTTTCTGATCTCCTGGCTTCCATTCAACTGCTTCAAGGCCATCCATGTTGCGTTACTGATCATCAATGGAGATCTTAATGAGGACACCTATGTTGTCATACATAGAGGACTCATGCTCTCCTGCTGTTTGGCATTTCTTAACAGCTGCGTCAATCCGGCTATCTACTTCTTTCTCGATCAACATTTCAGACGCAGAGCTTCCATGTTGTGTCTGAGCTGTCTTAGTcaaaatgaccaagcacaccagAGTTACATCACCTCGAATTCTTACTCCAACGGCACATCTGAGACCTGCTCTGGAAATACATCAACCCGCGGGCGGCTTTTCTCACTTACTCAAAAGGCATGAAATCTGTTTCTCAATCTGTCTTTTTCCGACTGCCAACTTTCGCTTCTAATGaaactttaaaattaaacaaGCATACCGTAGGTCATTTGCTATAACTAGATATCAAGTAATCATGTTGAGCATTTAGTATTAATTTTGTGCATTTCTGCATTGCATTTTTACATAGGAATCAATCCATTGGTGAACATATTATATAGTGGATAAG

Function

symbol description
gpr25 Enables apelin receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to act upstream of or within signal transduction. Located in plasma membrane. Orthologous to human GPR25 (G protein-coupled receptor 25).

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0007165 signal transduction biological_process
GO:0005886 plasma membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0060182 apelin receptor activity molecular_function
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG:

id description
ko04030 G protein-coupled receptors

ZFIN:

id description
ZDB-GENE-141216-12 Enables apelin receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to act upstream of or within signal transduction. Located in plasma membrane. Orthologous to human GPR25 (G protein-coupled receptor 25).

Ensembl:

ensembl_id ENSDARG00000057112

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00006751 True 1330 mRNA 0.45 1 24703108 24704437

Neighbor

gene id symbol gene type direction distance location
XLOC_003448 syt6b coding upstream 39077 24620742 ~ 24664031 (+)
XLOC_003447 BX072564.1 coding upstream 121994 24580579 ~ 24581114 (+)
XLOC_003446 rbm39a coding upstream 347015 24339362 ~ 24356093 (+)
XLOC_003445 rem1 coding upstream 371056 24313931 ~ 24332052 (+)
XLOC_003444 AL831791.1 coding upstream 524170 24178823 ~ 24178938 (+)
XLOC_003450 inavab coding downstream 12400 24716837 ~ 24756816 (+)
XLOC_003451 rnpep coding downstream 54530 24758967 ~ 24783118 (+)
XLOC_003452 cyb5r1 coding downstream 81941 24786378 ~ 24799675 (+)
XLOC_003453 adipor1a coding downstream 95719 24800156 ~ 24815193 (+)
XLOC_003454 rabif coding downstream 111230 24815667 ~ 24817637 (+)
XLOC_003369 CR854846.2 misc upstream 8580026 16122786 ~ 16123082 (+)
XLOC_003318 CR450764.6 misc upstream 11991112 12711700 ~ 12711996 (+)
XLOC_003317 CR450764.16 misc upstream 12008845 12693967 ~ 12694263 (+)
XLOC_003316 CR450764.11 misc upstream 12017509 12685304 ~ 12685599 (+)
XLOC_003315 CR450764.18 misc upstream 12023080 12679732 ~ 12680028 (+)
XLOC_003442 NA non-coding upstream 392463 24120291 ~ 24310645 (+)
XLOC_003443 NA non-coding upstream 525457 24176418 ~ 24177651 (+)
XLOC_003441 FP102969.1 non-coding upstream 551891 24116083 ~ 24151217 (+)
XLOC_003463 NA non-coding downstream 355025 25059462 ~ 25060098 (+)
XLOC_003466 NA non-coding downstream 477420 25181857 ~ 25228195 (+)
XLOC_003467 NA non-coding downstream 552375 25256812 ~ 25266235 (+)
XLOC_003487 NA non-coding downstream 1124933 25829370 ~ 25830337 (+)
XLOC_003488 CR318604.1 non-coding downstream 1373510 26077947 ~ 26078061 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000306_02626856_02627986 NA coding CI01000306 null 2626593 ~ 2628184 (+)