XLOC_003492 (cpne1)


Basic Information

Item Value
gene id XLOC_003492
gene name cpne1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 26375979 ~ 26401674 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00006840
GTCCCAGCGTTGAAACTGAACAGATTGAGCACGACCAGACGCAGAAGATCAAGAGGTGGAAGAACACAACAGGAGCGCCTcgtctttattatttaaaaaagataatttaAGACAAATTATTTCGatggccGCTCAGTGTGTGTCCAAAGTCGAGCTCTCCATCTCTTGTAATAATCTCCTGGATAAAGATGTTGGATCCAAATCTGATCCTCTCTGTGTTCTGCTGCAGAGCGTCGGGGATGACAAATGGACAGAGGTAGCACGCACAGAGAGAGTAAAGAATTGCCAGGATCCTCAGTTCTCCACAAAACTTCACATTGACTACTACTTTGAAAAGGTGCAGAAGCTAAAGTTTGGTGTCTATGACATTGACAACAAGTCTGTGGACCTCGGTGATGATGACTTTCTGGGAGGCTTTGAAGGCACCCTTGGACAGATCGTGTCAAGTAGGAAGCTTACCAGACCACTTCAACTCAAGGCAGCAAAGCCAGCTGGGAAAGGCACAATAACAATTACAGCTGAGGAGGTGAAGGATAACAGGGCTATTGTGATGGAGATAGAGGCCAAAAACCTGGATAAAAAGgatttgttTGGAAAGTCTGATCCATTCTTGGAGTTTTTCAAGCAAGATGAGGATGGGAAATGGCAGCTAGTTCACAGGACAGAGGTCATCAAGAATAATTTAAACCCATCTTGGAAAAAGTTTACTGTCTCCTTGCACACATTCTGCAATGGTGATCTGAACAAACCAATCAAGGTAACTTGTTACGATAAGGATGAAGACACGAGTTCAGACATGATAGGAGAGTTCACCTGCACCACCGCTAAGCTAATGGAGGCTAAAGACAATGCGGTTGAGTTTGACTGCATACACCCAGAGAagcaaaagaagaaaaagagttaTAAGAACTCGGGAGTCATCAAGATTAAAGATTGCAAGCTTGAGACGCAGTATTCATTTCTGGATTATGTGATGGGAGGTTGCCAAATTAACTTCACGGTGGGTATTGACTTCACTGGCTCAAATGGAGACCCCCGCTCACCTGACTCTCTGCACTATCTCAACCCTAATGGTGTTAACCAGTATCTGTCTGCCATCTGGTCTGTTGGCCAGGTGGTCCAAGACTATGATAGtgataagcttttcccagccttTGGATTTGGTGCCCAAGTGCCTCCGAACTTCCAGGTATCACATGAGTTCCCATTGAACTTCAACCCTAACAGCCCATATTGCCAAGGAGTGGAGGGCATTGTAAATGCCTATCGCTCAGTTTTGCCTCAACTTCGTCTCTATGGACCTACCAACTTCTCCCCCATTATAAATCATGTGGCCCGAATTGCATCTGGAGCCGCTCAACAACCAAATGCAGCACAATACTTTGTGCTGTTAATCATCACTGACGGAGAGATTACTGATCTCGACCAGACCAGACAATCCATCGTAAACAGCTCCAAACTGCCCATGTCCATCATTATTGTGGGTGTGGGTGAGGCAGACTTTAAGGCCATGGAGTTTTTGGATGGGGACAATGGAGTGCTTAAATCTATAACCGGAGAGTCAGCGGTCAGAGATATTGTGCAGTTTGTGCCCTTCAAGCAGTTTGCCAATGCTCCTAAAGAAGCACTTGCTCAGAGCGTTCTTGCCGAAGTGCCATCTCAGCTGGTGACATACTTCAAAATGAGAAATCTGCCTCCTGTCAACCCACCTGCACCGACAAAATAGACACAGGCTTGCTCTGAAGAGTGaatcatatgcatctataatgcATAGAAGTTTGAGTAAGTATGGATCACCACTAGAGGGAACCACAGCTCCATGGAAGAACTTGTAGAAAGACCACTTATCTTAATTtccctttttttatatattatgcaatcattttattttcatatatatttctTTAATCTTCCAGAATGAACATTATTCCTTATTATTCTATTCCAACTGGAAAAGAGTTTCTTTTTTTACAGAGCTATTTTTCTGTGAAGTtgcatatattatatacatatgtgATGCTATAGTTTACGCACACAGATGCCTTGATTTGCTTTAGCCAATATTTGAAATCACTTTGTTGGCCTTGCCTTGCTTTTggcacacacatatgcaaaatCTCAATCAGGAATGCTGGTTTATGTAATTCTCCGCACTTTCTGCTGTATAATAGTTGTCAAAGCAAAGTGAATGATACTCATTTACCATCTGcgctaaaataaataatcatgctGCCCTTATAGAGATGATTAGTAGCTAGAGACATACCAAAGAAATCACTGCATGCCTTTCACTAGCAAATTAGAGCTTTCAGAATCTTTTAGTAGAATTATATTGCCAATATGAATGTCGTTTTGACCAAGATATATAACATTCATATACTACTTAATATATAAAGTATGAACAATGGCTGAGTTAAATAgaatttaaaatgctattttactTTTACAAAGCATTATGTTGATCATAGAAATGCCTTATCAGATATGTTTTTCTAAACAGCTGTTGTTATGTTGAGGATCTAGAAGTTTTACAGTTTCCTTTGTGCCAAGAAGAAtcttttaaagatttgttttgagAGCCAGAAATTATGTTGTTCATTTGATTCCTCTAACACAAATCTTTGCACCTTAATCGCACAGCAAACTCAATCTGCATATGTATGTATGCTCGCACTTGCCATGTAAAGCCTTATGGGACCATTAGCCTGATTAAagcttctttttttaatgtagtgATTTAAAGGGAATGGGTTCTTAATCCTGTTATGAGCAGCCATTGGTTTTTCCTAATGATGAAATCTAATGTTTACACTGCAACATGTTCAGTTCTTCAGAAGCCGTTGTAGCTATTACACTGCTTTTTATAACTGTctaaaaagaaataaagacattGCCTTATTAACACACA
>TCONS_00006841
AGATTGAGCACGACCAGACGCAGAAGATCAAGAGGTGGAAGAACACAACAGGAGCGCCTcgtctttattatttaaaaaagataatttaAGACAAATTATTTCGGTGTGTGTTGTTGCACCTCAGCATGGCTGTGGTCATCCGTTTGCAGGGTCTCCCCATTGTGGCTGGGACTATGGATATACGCCATTTCTTCTCTGGATTGACCATCCCGGATGGTGGTGTGCATATTGTAGGGGGTGAACACGGTGAGGCTTTTATCGTGTTCGCCACAGATGAAGATGCGAGGCTTGGAATGATGCGCACAGGGGGGTCAATCAAAGGTTCCAAGGTGTCTCTGTTGCTGAGTAGCAAAACTGAAATGCAAAATATGATTGAGCTGA
>TCONS_00006842
AGACGCAGAAGATCAAGAGGTGGAAGAACACAACAGGAGCGCCTcgtctttattatttaaaaaagataatttaAGACAAATTATTTCGtcaagaattgattttaaatgatTGCCGTCAGGATTGGCTTGGGTGTCCTGTGCATCTTGTAACGAAGCAGCACGTTTAATACAGGTGTGTGTTGTTGCACCTCAGCATGGCTGTGGTCATCCGTTTGCAGGGTCTCCCCATTGTGGCTGGGACTATGGATATACGCCATTTCTTCTCTGGATTGACCATCCCGGATGGTGGTGTGCATATTGTAGGGGGTGAACACGGTGAGGCTTTTATCGTGTTCGCCACAGATGAAGATGCGAGGCTTGGAATGATGCGCACAGGGGGGTCAATCAAAGGTTCCAAGGTGTCTCTGTTGCTGAGTAGCAAAACTGAAATGCAAAATATGATTGAGCTGAGTCGTAGGCGCTTTGAAACTGGTAGCGCAGATGTTGCCGCAGGAAATGGCAGTAGGCCTGGGCCACCTGTTAGCACTGGTGGAAGTGGAAGGGGCAACTTGCCTACCACAGCACAAGGGTTTAGTAACACAACTTCTACTACTTCCACAACAGCAGTGTCAACACATGAGCCTGTTAGCAACAAGACTGTCCCTACCTTTTCAACCACAACCATGGGCAGCATGCCCCCAAACTTTAATAATTTCACCAGCCCAAGCCTTAGTTTGGGATCCACAATGACAACAGCAATGTCATCCTTGAATTCTGTACCTCCCCCAATACCTCCGTTGCCCGCCATGCCAACACTACCACCAATGCCCCCTATACCAGTACCACCACCAGTATCTGCATTGCCACCAGTACCAACTGTTAATCCACTAACATCAGTGCCTCAAGTCCCTCCCATTGCACACATGCCTCACCTGTCTGCGCTTCCACCATTCAACCCAGGCATTCCTCCACCTGTTGGCCCCGTCCCTGGTGGTTTAGCTGCCTCTGGTCCACTGTCTCTCGGAAATTCCAATCCAATGTTCCTGAATCCGTTAAACCCTCTAAACCCCCTGAACCTCCAACCTCACATGAAATCAGCCATTACAAACCCAGATGACTTTTACGTTCATCTGCATGGCCTTCCCTTTTCAGTCCTTGAACATGAGATTAGAGATTTTTTCCATGGACTTGGAATCGAGTCTATTCGTTTGCTCAAAGACAACTTGGGTAGAAACAGTGGCAGGGCATTGGTTAAGTTCTACTCGCCACATGAGTCTTTTGAAGCCCTGAAAAGAAACGCAGGAATGATTGGCCAAAGATATATTGAGGTTTCTCCAGCTACAGAGCGACAGTGGAGAGAGAGTGTTGGACATTCTAAAGCAGGTGGAGACAGTGAACACAACAGACATCGCCGCAGAAGCGCTAATTCGCCAACACCCTCTAGTGGTGAGCGAGCCAGATCCCGATCTCCTCACAAACTAGACTATTGTGTATATTTGAAAGGACTCCCATATGAAGCAGAAAATAAGCAGATCTTTGAGTTTTTCAAAAATCTTGACATTGTTGAAGATAGCATTTACATTGCATATGGACCCAATGGCAGGGCAACTGGTGAGGGATTTGTTGAGTTTAGAAATGAAATGGACTATAAAGCTGCTCTTGGATGCCATATGCAGTACATGGGTAGTCGTTTCATACAAGTGCATCCAATCACAAAGAAAAACATGTATGAAAAGATTGATGCCATTCGCAAACGAATGCAGGGCTCTCAGGGTGATCAAAAGAGTAGTTCTGGAGGGGGAAAGAGTGCCAAGAGTTGTGCTCACATAACCAATATTCCCTATAACGTGACAAAAAAAGATGTTCGACTGTTTCTTGATGGCATAGAGTTGTTTGAAGAAAGTCTTAAGGTGCTAGTTGACTCTAATGGTAATGGTCTTGGCCAAGCTATTGTGCAGTTTAAGTCAGATGAGGATGCACTTAAAGCCGAGAGGCTGCATAGGCAGAAATTGAATGGCAGGGATGCCTTTGTTCATTTGGTTACTTTTGACCAGATGAAAGAAGTTGAAAGAAATCCACCTCCGCAAGCAAAAAGAGGACAGAAATCCCAACAAAATGCCCATGCTCATCTCCATTCACATGTCCATGCACATGCTCATGTTCAACCCCAAGCCCAAGTTCCCCAGGCACCTCACGCTTTTCCAACAATGACAGGCGATGAGTTCAGTTTTCTAAGAAATGCTGTAGGGACTCTTGGAAATGGTCCTCCTTTTGTCAACCCGTTTGTTGCTCCAGGCAATGGTCTGACATGTCCGCCACCTTTGCCCCCCCTTGGCACAGCTTTGGCTGACGTCTCGCTTAGTGTTCCACCACCTATGGTTGGAGGACCTCTGCCTGGTCCTATTCTAGAGCACCCTGGTTTCAGACCCAGTGTCAATACGGCACCACCTGGTTTTGTTGGCGCACCAGAGCCTTTAAGGGTGATGCCACCATTTGATAATGGGTCTTCTCGTAAAGCTGTCACTCAAAATCGCGCTGGGAATCAAGGTCAGAGGCCACCTTCTGACAATCTTAGAGGACCATCCCCTGGTGGTCCAGGTAATTCACGGCCTACAATTGTCAAAATTCAAAACATGCCATTTACTGTGACTGTGGATGAGATCATCGATTTCTTCTATGGCTATCAAGTTTTGCCTGGTTCTGTATGCTTGCAATTCAGTGATAAAGGTTTGCCCACTGGGGAAGCAATGGTTGCTTTTGATTCCCATGATGAAGCTATGGCTGCTGTTATGGACTTGAATGATAGGCCTATTGGGGCAAGAAAAGTTAAGATCACTTTGGGATAAAAACAAGAACTTTGTCATCGCAATGTGTCTTTTCTTTTGACACTGTTTTTTTGAAAAACTGACTAATCTTGTTGTTTTTATGTACAGAAGAAGAAGCTGACAAGTATTAGATTCTTTTTCAATGGCCACATTATTTATCCAAGACTGTCGTTACATGAAGCATGACATAACTGAGAAAAGactgtttattttaaaacttcAAACAGCATTGTTTAAGACTTTAGGCCaataatgtgtttgtttgcatatgCAGATCTGAATAAGGGGCATCTTTATAGTGGTATGTATGTTTAGTAGAGTTTAATAGCTGCGCAGAGGATTAGTTGCTTACATCCCAGAAttattgttttgcatttgtgCTCAAGGTTTACACATATGTATATGCTCCATGCCGAGTTTTCTTCTGAGGTAAAGAAAAAAGTGCTGCCATGCATTGTTGAATACATGCTCACACTTCAATTTCAATGTTTGCTCtgctgcaaagtttttttttctatgtcAATAAAAGGCAACTGTCATGTCTTTATCATTTTCTGTTGCTGTCATGTTGGATTGTGCTAAAAGCCTGATGTCAAACCATGAATTTATTGTAAATGCTAGGCGGAGATGTGAAGCAATTGCAGCattgtaatataatgtatatgaaaGCATTTTACTCTCTTTGCTTAGCTGTCTTCATAACATGTTGCTGTGGTGTTTGATAGctttcacttctttttttttttttttttttttggaggtttggcttgttttaaaatgtctaatatgGATCAGTTGttatactttttgttttgttttttgacgtTCCAGCGCTTTTCTCTTGTAAATACTTTCCAGCTGAACTATTTTGTCAATAAAATGCCATTCCTGAAA
>TCONS_00006844
AGACGCAGAAGATCAAGAGGTGGAAGAACACAACAGGAGCGCCTcgtctttattatttaaaaaagataatttaAGACAAATTATTTCGtcaagaattgattttaaatgatTGCCGTCAGGATTGGCTTGGGTGTCCTGTGCATCTTGTAACGAAGCAGCACGTTTAATACAGGTGTGTGTTGTTGCACCTCAGCATGGCTGTGGTCATCCGTTTGCAGGGTCTCCCCATTGTGGCTGGGACTATGGATATACGCCATTTCTTCTCTGGATTGACCATCCCGGATGGTGGTGTGCATATTGTAGGGGGTGAACACGatggccGCTCAGTGTGTGTCCAAAGTCGAGCTCTCCATCTCTTGTAATAATCTCCTGGATAAAGATGTTGGATCCAAATCTGATCCTCTCTGTGTTCTGCTGCAGAGCGTCGGGGATGACAAATGGACAGAGGTAGCACGCACAGAGAGAGTAAAGAATTGCCAGGATCCTCAGTTCTCCACAAAACTTCACATTGACTACTACTTTGAAAAGGTGCAGAAGCTAAAGTTTGGTGTCTATGACATTGACAACAAGTCTGTGGACCTCGGTGATGATGACTTTCTGGGAGGCTTTGAAGGCACCCTTGGACAGATCGTGTCAAGTAGGAAGCTTACCAGACCACTTCAACTCAAGGCAGCAAAGCCAGCTGGGAAAGGCACAATAACAATTACAGCTGAGGAGGTGAAGGATAACAGGGCTATTGTGATGGAGATAGAGGCCAAAAACCTGGATAAAAAGgatttgttTGGAAAGTCTGATCCATTCTTGGAGTTTTTCAAGCAAGATGAGGATGGGAAATGGCAGCTAGTTCACAGGACAGAGGTCATCAAGAATAATTTAAACCCATCTTGGAAAAAGTTTACTGTCTCCTTGCACACATTCTGCAATGGTGATCTGAACAAACCAATCAAGGTTGAGTGTTTTGATTATGATAGCGATGGCTCTCATGATCTGATTGGTGTGTTTCAAACTAATGTGTCAGATCTGCAGAAAGCAGTTCATGGCTCACCGGTTGAGTTTGACTGCATACACCCAGAGAagcaaaagaagaaaaagagttaTAAGAACTCGGGAGTCATCAAGATTAAAGATTGCAAGCTTGAGACGCAGTATTCATTTCTGGATTATGTGATGGGAGGTTGCCAAATTAACTTCACGGTGGGTATTGACTTCACTGGCTCAAATGGAGACCCCCGCTCACCTGACTCTCTGCACTATCTCAACCCTAATGGTGTTAACCAGTATCTGTCTGCCATCTGGTCTGTTGGCCAGGTGGTCCAAGACTATGATAGtgataagcttttcccagccttTGGATTTGGTGCCCAAGTGCCTCCGAACTTCCAGGTATCACATGAGTTCCCATTGAACTTCAACCCTAACAGCCCATATTGCCAAGGAGTGGAGGGCATTGTAAATGCCTATCGCTCAGTTTTGCCTCAACTTCGTCTCTATGGACCTACCAACTTCTCCCCCATTATAAATCATGTGGCCCGAATTGCATCTGGAGCCGCTCAACAACCAAATGCAGCACAATACTTTGTGCTGTTAATCATCACTGACGGAGAGATTACTGATCTCGACCAGACCAGACAATCCATCGTAAACAGCTCCAAACTGCCCATGTCCATCATTATTGTGGGTGTGGGTGAGGCAGACTTTAAGGCCATGGAGTTTTTGGATGGGGACAATGGAGTGCTTAAATCTATAACCGGAGAGTCAGCGGTCAGAGATATTGTGCAGTTTGTGCCCTTCAAGCAGTTTGCCAATGCTCCTAAAGAAGCACTTGCTCAGAGCGTTCTTGCCGAAGTGCCATCTCAGCTGGTGACATACTTCAAAATGAGAAATCTGCCTCCTGTCAACCCACCTGCACCGACAAAATAGACACAGGCTTGCTCTGAAGAGTGaatcatatgcatctataatgcATAGAAGTTTGAGTAAGTATGGATCACCACTAGAGGGAACCACAGCTCCATGGAAGAACTTGTAGAAAGACCACTTATCTTAATTtccctttttttatatattatgcaatcattttattttcatatatatttctTTAATCTTCCAGAATGAACATTATTCCTTATTATTCTATTCCAACTGGAAAAGAGTTTCTTTTTTTACAGAGCTATTTTTCTGTGAAGTtgcatatattatatacatatgtgATGCTATAGTTTACGCACACAGATGCCTTGATTTGCTTTAGCCAATATTTGAAATCACTTTGTTGGCCTTGCCTTGCTTTTggcacacacatatgcaaaatCTCAATCAGGAATGCTGGTTTATGTAATTCTCCGCACTTTCTGCTGTATAATAGTTGTCAAAGCAAAGTGAATGATACTCATTTACCATCTGcgctaaaataaataatcatgctGCCCTTATAGAGATGATTAGTAGCTAGAGACATACCAAAGAAATCACTGCATGCCTTTCACTAGCAAATTAGAGCTTTCAGAATCTTTTAGTAGAATTATATTGCCAATATGAATGTCGTTTTGACCAAGATATATAACATTCATATACTACTTAATATATAAAGTATGAACAATGGCTGAGTTAAATAgaatttaaaatgctattttactTTTACAAAGCATTATGTTGATCATAGAAATGCCTTATCAGATATGTTTTTCTAAACAGCTGTTGTTATGTTGAGGATCTAGAAGTTTTACAGTTTCCTTTGTGCCAAGAAGAAtcttttaaagatttgttttgagAGCCAGAAATTATGTTGTTCATTTGATTCCTCTAACACAAATCTTTGCACCTTAATCGCACAGCAAACTCAATCTGCATATGTATGTATGCTCGCACTTGCCATGTAAAGCCTTATGGGACCATTAGCCTGATTAAagcttctttttttaatgtagtgATTTAAAGGGAATGGGTTCTTAATCCTGTTATGAGCAGCCATTGGTTTTTCCTAATGATGAAATCTAATGTTTACACTGCAACATGTTCAGTTCTTCAGAAGCCGTTGTAGCTATTACACTGCTTTTTATAACTGTctaaaaagaaataaagacattGCCTTATTAACACA
>TCONS_00006843
AGACGCAGAAGATCAAGAGGTGGAAGAACACAACAGGAGCGCCTcgtctttattatttaaaaaagataatttaAGACAAATTATTTCGatggccGCTCAGTGTGTGTCCAAAGTCGAGCTCTCCATCTCTTGTAATAATCTCCTGGATAAAGATGTTGGATCCAAATCTGATCCTCTCTGTGTTCTGCTGCAGAGCGTCGGGGATGACAAATGGACAGAGGTAGCACGCACAGAGAGAGTAAAGAATTGCCAGGATCCTCAGTTCTCCACAAAACTTCACATTGACTACTACTTTGAAAAGGTGCAGAAGCTAAAGTTTGGTGTCTATGACATTGACAACAAGTCTGTGGACCTCGGTGATGATGACTTTCTGGGAGGCTTTGAAGGCACCCTTGGACAGATCGTGTCAAGTAGGAAGCTTACCAGACCACTTCAACTCAAGGCAGCAAAGCCAGCTGGGAAAGGCACAATAACAATTACAGCTGAGGAGGTGAAGGATAACAGGGCTATTGTGATGGAGATAGAGGCCAAAAACCTGGATAAAAAGgatttgttTGGAAAGTCTGATCCATTCTTGGAGTTTTTCAAGCAAGATGAGGATGGGAAATGGCAGCTAGTTCACAGGACAGAGGTCATCAAGAATAATTTAAACCCATCTTGGAAAAAGTTTACTGTCTCCTTGCACACATTCTGCAATGGTGATCTGAACAAACCAATCAAGGTTGAGTGTTTTGATTATGATAGCGATGGCTCTCATGATCTGATTGGTGTGTTTCAAACTAATGTGTCAGATCTGCAGAAAGCAGTTCATGGCTCACCGGTTGAGTTTGACTGCATACACCCAGAGAagcaaaagaagaaaaagagttaTAAGAACTCGGGAGTCATCAAGATTAAAGATTGCAAGCTTGAGACGCAGTATTCATTTCTGGATTATGTGATGGGAGGTTGCCAAATTAACTTCACGGTGGGTATTGACTTCACTGGCTCAAATGGAGACCCCCGCTCACCTGACTCTCTGCACTATCTCAACCCTAATGGTGTTAACCAGTATCTGTCTGCCATCTGGTCTGTTGGCCAGGTGGTCCAAGACTATGATAGtgataagcttttcccagccttTGGATTTGGTGCCCAAGTGCCTCCGAACTTCCAGGTATCACATGAGTTCCCATTGAACTTCAACCCTAACAGCCCATATTGCCAAGGAGTGGAGGGCATTGTAAATGCCTATCGCTCAGTTTTGCCTCAACTTCGTCTCTATGGACCTACCAACTTCTCCCCCATTATAAATCATGTGGCCCGAATTGCATCTGGAGCCGCTCAACAACCAAATGCAGCACAATACTTTGTGCTGTTAATCATCACTGACGGAGAGATTACTGATCTCGACCAGACCAGACAATCCATCGTAAACAGCTCCAAACTGCCCATGTCCATCATTATTGTGGGTGTGGGTGAGGCAGACTTTAAGGCCATGGAGTTTTTGGATGGGGACAATGGAGTGCTTAAATCTATAACCGGAGAGTCAGCGGTCAGAGATATTGTGCAGTTTGTGCCCTTCAAGCAGTTTGCCAATGCTCCTAAAGAAGCACTTGCTCAGAGCGTTCTTGCCGAAGTGCCATCTCAGCTGGTGACATACTTCAAAATGAGAAATCTGCCTCCTGTCAACCCACCTGCACCGACAAAATAGACACAGGCTTGCTCTGAAGAGTGaatcatatgcatctataatgcATAGAAGTTTGAGTAAGTATGGATCACCACTAGAGGGAACCACAGCTCCATGGAAGAACTTGTAGAAAGACCACTTATCTTAATTtccctttttttatatattatgcaatcattttattttcatatatatttctTTAATCTTCCAGAATGAACATTATTCCTTATTATTCTATTCCAACTGGAAAAGAGTTTCTTTTTTTACAGAGCTATTTTTCTGTGAAGTtgcatatattatatacatatgtgATGCTATAGTTTACGCACACAGATGCCTTGATTTGCTTTAGCCAATATTTGAAATCACTTTGTTGGCCTTGCCTTGCTTTTggcacacacatatgcaaaatCTCAATCAGGAATGCTGGTTTATGTAATTCTCCGCACTTTCTGCTGTATAATAGTTGTCAAAGCAAAGTGAATGATACTCATTTACCATCTGcgctaaaataaataatcatgctGCCCTTATAGAGATGATTAGTAGCTAGAGACATACCAAAGAAATCACTGCATGCCTTTCACTAGCAAATTAGAGCTTTCAGAATCTTTTAGTAGAATTATATTGCCAATATGAATGTCGTTTTGACCAAGATATATAACATTCATATACTACTTAATATATAAAGTATGAACAATGGCTGAGTTAAATAgaatttaaaatgctattttactTTTACAAAGCATTATGTTGATCATAGAAATGCCTTATCAGATATGTTTTTCTAAACAGCTGTTGTTATGTTGAGGATCTAGAAGTTTTACAGTTTCCTTTGTGCCAAGAAGAAtcttttaaagatttgttttgagAGCCAGAAATTATGTTGTTCATTTGATTCCTCTAACACAAATCTTTGCACCTTAATCGCACAGCAAACTCAATCTGCATATGTATGTATGCTCGCACTTGCCATGTAAAGCCTTATGGGACCATTAGCCTGATTAAagcttctttttttaatgtagtgATTTAAAGGGAATGGGTTCTTAATCCTGTTATGAGCAGCCATTGGTTTTTCCTAATGATGAAATCTAATGTTTACACTGCAACATGTTCAGTTCTTCAGAAGCCGTTGTAGCTATTACACTGCTTTTTATAACTGTctaaaaagaaataaagacattGCCTTATTAACACA
>TCONS_00006845
CATAATACCTGCAGAAGCCATGGCTACATTTCCATTCTGTTTACTTCTATTATTTCTCTGAATTTTGCTGTAGAACGTGAATGAGAAGTTCTAATTTTTTGTAGGTTGAGTTTGACTGCATACACCCAGAGAagcaaaagaagaaaaagagttaTAAGAACTCGGGAGTCATCAAGATTAAAGATTGCAAGCTTGAGACGCAGTATTCATTTCTGGATTATGTGATGGGAGGTTGCCAAATTAACTTCACGGTGGGTATTGACTTCACTGGCTCAAATGGAGACCCCCGCTCACCTGACTCTCTGCACTATCTCAACCCTAATGGTGTTAACCAGTATCTGTCTGCCATCTGGTCTGTTGGCCAGGTGGTCCAAGACTATGATAGtgataagcttttcccagccttTGGATTTGGTGCCCAAGTGCCTCCGAACTTCCAGGTATCACATGAGTTCCCATTGAACTTCAACCCTAACAGCCCATATTGCCAAGGAGTGGAGGGCATTGTAAATGCCTATCGCTCAGTTTTGCCTCAACTTCGTCTCTATGGACCTACCAACTTCTCCCCCATT
>TCONS_00006846
taaaccaatttatACCCCTCCAGCCCCACTATGAtgtattaaattgataaaaagtgaaagtaaagacatttataatgttaaaggTTTTTATCTCCATTAAATTTCATTGGTTATAAGTTATAACTTGTCAATAACCGCATTAATGTTAAGCAGCGATTAGTAAAATTATCACATTGACATTAGGATGTAAAGCcattatttcacattatattatatttgacattatttgttttctgtatgtttaaatacattcagcATGAGATTTTTTTGGTAGCACCATATTGGAATAATTTGATCTGCTACTAATTAGTTAAATGATGTATTTGCTTTCTGTCTTGTTTTGTAGtgataagcttttcccagccttTGGATTTGGTGCCCAAGTGCCTCCGAACTTCCAGGTATCACATGAGTTCCCATTGAACTTCAACCCTAACAGCCCATATTGCCAAGGAGTGGAGGGCATTGTAAATGCCTATCGCTCAGTTTTGCCTCAACTTCGTCTCTATGGACCTACCAACTTCTCCCCCATTATAAATCATGTGGCCCGAATTGCATCTGGAGCCGCTCAACAACCAAATGCAGCACAATACTTTGTGCTGTTAATCATCACTGACGGAGAGATTACTGATCTCGACCAGACCAGACAATCCATCGTAAACAGCTCCAAACTGCCCATGTCCATCATTATTGTGGGTGTGGGTGAGGCAGACTTTAAGGCCATGGAGTTTTTGGATGGGGACAATGGAGTGCTTAAATCTATAACCGGAGAGTCAGCGGTCAGAGATATTGTGCAGTTTGTGCCCTTCAAGCAGTTTGCCAA

Function

symbol description
cpne1 Predicted to enable calcium-dependent phospholipid binding activity. Predicted to be involved in cellular response to calcium ion; positive regulation of tumor necrosis factor-mediated signaling pathway; and regulation of I-kappaB kinase/NF-kappaB signaling. Predicted to be active in plasma membrane. Is expressed in epidermis; notochord; periderm; polster; and vasculature. Orthologous to human CPNE1 (copine 1).

GO:

id name namespace
GO:0071277 cellular response to calcium ion biological_process
GO:0043122 regulation of I-kappaB kinase/NF-kappaB signaling biological_process
GO:1903265 positive regulation of tumor necrosis factor-mediated signaling pathway biological_process
GO:0005886 plasma membrane cellular_component
GO:0005544 calcium-dependent phospholipid binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-030131-3562 Predicted to enable calcium-dependent phospholipid binding activity. Predicted to be involved in cellular response to calcium ion; positive regulation of tumor necrosis factor-mediated signaling pathway; and regulation of I-kappaB kinase/NF-kappaB signaling. Predicted to be active in plasma membrane. Is expressed in epidermis; notochord; periderm; polster; and vasculature. Orthologous to human CPNE1 (copine 1).
ZDB-GENE-081022-16 Predicted to enable RNA binding activity. Predicted to be involved in regulation of RNA splicing. Predicted to be part of ribonucleoprotein complex. Predicted to be active in nucleoplasm. Human ortholog(s) of this gene implicated in schizophrenia 19. Orthologous to human RBM12 (RNA binding motif protein 12).

Ensembl:

ensembl_id ENSDARG00000075536 ENSDARG00000100636

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00006840 False 2908 mRNA 0.40 16 26375979 26401674
TCONS_00006841 False 381 mRNA 0.47 2 26376000 26380159
TCONS_00006842 False 3698 mRNA 0.43 3 26376015 26383407
TCONS_00006844 False 3100 mRNA 0.41 18 26376015 26401672
TCONS_00006843 False 2873 mRNA 0.40 16 26376015 26401672
TCONS_00006845 False 572 lncRNA 0.44 6 26395913 26398030
TCONS_00006846 True 823 lncRNA 0.39 4 26396639 26398487

Neighbor

gene id symbol gene type direction distance location
XLOC_003491 ppcs coding upstream 6430 26363435 ~ 26369549 (+)
XLOC_003490 NA coding upstream 141910 26226082 ~ 26234069 (+)
XLOC_003489 NA coding upstream 179834 26188517 ~ 26196145 (+)
XLOC_003488 CR318604.1 coding upstream 297918 26077947 ~ 26078061 (+)
XLOC_003487 NA coding upstream 545642 25829370 ~ 25830337 (+)
XLOC_003493 fer1l4 coding downstream 1660 26403334 ~ 26467054 (+)
XLOC_003494 unm_sa1614 coding downstream 74479 26476153 ~ 26562346 (+)
XLOC_003495 dynlrb1 coding downstream 202550 26604224 ~ 26615608 (+)
XLOC_003496 si:dkey-57n24.6 coding downstream 268050 26669724 ~ 26683712 (+)
XLOC_003497 NA coding downstream 301283 26702957 ~ 26709080 (+)
XLOC_003369 CR854846.2 misc upstream 10252897 16122786 ~ 16123082 (+)
XLOC_003318 CR450764.6 misc upstream 13663983 12711700 ~ 12711996 (+)
XLOC_003317 CR450764.16 misc upstream 13681716 12693967 ~ 12694263 (+)
XLOC_003316 CR450764.11 misc upstream 13690380 12685304 ~ 12685599 (+)
XLOC_003315 CR450764.18 misc upstream 13695951 12679732 ~ 12680028 (+)
XLOC_003467 NA non-coding upstream 1109744 25256812 ~ 25266235 (+)
XLOC_003499 NA non-coding downstream 805522 27207196 ~ 27208386 (+)
XLOC_003501 NA non-coding downstream 1002197 27403871 ~ 27414474 (+)
XLOC_003502 NA non-coding downstream 1112186 27513860 ~ 27526561 (+)
XLOC_003503 CR548622.1 non-coding downstream 1118782 27520456 ~ 27520573 (+)

Expression


Co-expression Network