XLOC_003522 (wu:fi42e03)


Basic Information

Item Value
gene id XLOC_003522
gene name wu:fi42e03
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 29537756 ~ 29540033 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00006891
ATGGGTGCTGCAACAATGTGGATTTTAAGTTCTTTAGCAGTGCTTATAGCCCTTAGTGCAAGTGATGTCACATCTGTTATTGCAAGTAGCCCTGGAAGCATGGGCAGCTATACTGGGTATAGTGCTGCAGTAAAAGGTGGCTATGATATCGGAAGCTACAGTTCTCTGGCTGGCTCTTCAGGTGTTTCCATCACAAGTGAAAAACCAAGCTCTGATTCTTCCACTAGAAGCCAACTTCAAGGATCTGGTGTTGTAGCTGGAAGTGGTAGTCTCGTTTATGGTACAGTGGGAAATAAAGCAAGTCTGGCCGTGTCTGAGTATGATATGAACCAATCAACTGATGTCCAAGAATCTGAAGTCATCAGCTCTTCAGTCTTGATGCCACTGCAGCAAAGCAGTTACTCTGTTCCTAAGCCTGTGCTGTTAACTTCCCAAGTGCAGACTGGCCCCCAGTCCAACAGTCAGCAACCAGCAAGTTCTGGAACCATGGCCCAGTCTGTCTCTCTCCAGTTGTCCCAGACCAGCGGCCATCAACTTCCACAACCTGGCTTCCAGTCTGCAGTTTATGCCAATAGACTGCCCCACAAGTCTGGTTCTAATACTGTTTTTGGTACCAGGCCAGTTCAAAATCCAGTATTCAATTCAAAGCCCCTTACTCCTAAAAAGGAGTCTGCACCAATATTACTATATGGCAGTATGCCAAGCAGCCTAGCTATGGCTAACTATGAACTTGTCAGCCAGTCCAGTGGCCAGACTGCAAGTCAGCCAAGCGGCATGCAGCCTCCCCATGTTGACATCTCTGTTCAGCCCAGCAGTCAGCTGATTCAACAGGAAGTCGATGCCACTGTAGAACAGGCCACCAGTCAACAGCTAGTTCAGACAAGCCAATCCATTTCCCAGTCAAATGACCAGAAACCACTACACGGTAGTTATGTCTTGACTGCTCAGCCCAGCAGCCTGACTCTTCTCAAGCCCCACAAAGGTAGACCTCAGTTTGGGTCCAAGCCTCCATCCAGTACCAGTCCTGTCTATAAACCAAGCTCAAGTCTTGTAGCTCAGTCCACTAGCCAAATGCCAGTACAAACCACCTACCAGTCTGTGCCCCAACATGGTCTACAACTGCCACTACAAGCCATCTACCAATCAGAGGCCCAGTCTGCTTCCCAAAAGCCAGGACAAACCAGCTACCTAACTGTGCCCCAAATTGTTGTTCAACCAGCACAAATCGGCTATCAGTCTGCAAGCCAGGCCAGTGTGCCACTACCAGTGCAGCCCGGCTCACAGTGGGTGGCACAGCTCGGTCTTCAACAGCCAGCGCATGTTGACTTCTCTGTATCCCTACCTATCAGCCAGCAAGCAGGACACTCCACCCATGAGTATGTTGTTGAGCAGAGTGGACAATCGCATTTCAAGCCGGTGCATTCCCATAGGGTTCACCAGATTGGCTCCAGTCTTTATTCATGTCAAGAGTTACCTCAGCATGGTTACCAGAGGAGATTTCAGTCTCCAGCTGTAACTTCGCACACCAAGCCTGTTGTACAGTCCGGCAACCAGACCCCTACAAAGTCTAAGCATCCCAAACCCCACACATCTACACTCCAATCCATTTTATCACCAGCTCATCCTAGCCATCAGTCTCTATCTCTGCCTGTCTACTCTCAAGCTTTGCCAGTGGAACACATGTACCAGCCTGTGGCACAATCAGGCTCTGAGACTGTCTCTCTCGCTGAATACCAGATATCCCCTGTTCCAGGACAGATTGTTTCCCAGCCTCAAATGCTGCCCAGTAGTCTGTCTCTCACTCAGTCCAGCCCTTCCTCAGGCATGCCATTGCagtccagcttccagcctctgGTACAATCAAGTTTTGAGACTGTCCTACCATCTGGATTTCAGACCTCTTCTGTTGTTGTGCCATCAAGTGTCCAGTCTACAAGTACCCAAGCCTTGAGTGGTCCGGTTGTTTCAAACCATGGGTCTGTGTTTCAGTCAGTGCAACCTGAACTTGCAATTCCACTACAGGTGAATTATCAGTCTGTCACAAGTCAAAATGCCCCTGGACCTGCTCCAAACAGTAAGCATCCATCCCAGAAGCTTTTCAAGCTGTTGCAACAAGTGAAGTCCTAG

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-030131-6284 No description available

Ensembl:

ensembl_id ENSDARG00000070709

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00006891 True 2127 mRNA 0.49 3 29537756 29540033

Neighbor

gene id symbol gene type direction distance location
XLOC_003521 CR450796.1 coding upstream 185535 29352101 ~ 29352221 (+)
XLOC_003520 NA coding upstream 329563 29207886 ~ 29208193 (+)
XLOC_003519 NA coding upstream 701057 28797267 ~ 28836699 (+)
XLOC_003518 NA coding upstream 874360 28662904 ~ 28663396 (+)
XLOC_003517 NA coding upstream 894056 28637462 ~ 28643700 (+)
XLOC_003523 BX548000.1 coding downstream 26713 29566746 ~ 29571528 (+)
XLOC_003524 NA coding downstream 50840 29590873 ~ 29591196 (+)
XLOC_003525 rnf207a coding downstream 131628 29671661 ~ 29677714 (+)
XLOC_003526 gucy1b2 coding downstream 199315 29739348 ~ 29755142 (+)
XLOC_003527 rpgrb coding downstream 230933 29770966 ~ 29790222 (+)
XLOC_003369 CR854846.2 misc upstream 13414674 16122786 ~ 16123082 (+)
XLOC_003318 CR450764.6 misc upstream 16825760 12711700 ~ 12711996 (+)
XLOC_003317 CR450764.16 misc upstream 16843493 12693967 ~ 12694263 (+)
XLOC_003316 CR450764.11 misc upstream 16852157 12685304 ~ 12685599 (+)
XLOC_003315 CR450764.18 misc upstream 16857728 12679732 ~ 12680028 (+)
XLOC_003530 NA non-coding downstream 365215 29905248 ~ 29906829 (+)
XLOC_003534 NA non-coding downstream 551122 30091155 ~ 30103960 (+)
XLOC_003537 NA non-coding downstream 712907 30252940 ~ 30253557 (+)

Expression


Co-expression Network