XLOC_035500 (pimr107)


Basic Information

Item Value
gene id XLOC_035500
gene name pimr107
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 13694950 ~ 13696012 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00069643
CCTCTTGAAGTTGCACTTCTCATCCTCGCCCATGGAGTATCCAGCGTTCCAGAAATAATCCAGCTTCTGGACTGGCAGGACCACGAGGACCATTATATAATGGTGTTGGAATACCCTTCACCCTGTGAGGACCTATATGCTTTCACAGAAAGCTATGGAGGATCCATAAGTGAAGGTTTAGCGCGTGTTGTTATGCAGCAGGCAACTCAAGCTGCATACATGTGCTGCCGCAATGGTGTTCTACATCGCGATATCAAACTTGAAAATCTACTAATCAACAAGGAGACACATAAAGTCAAATTAATAGACTTTGGGTGTGGAGACCTTCTCAAGAAATTACCCTACGATACATTTGCCGGCACCCTTGAGTACTGCCCCCCAGAGTTTGAGGAAACGGGTGAATACAATGGGAAGCCGGCAACAGTCTGGTCCCTTGGCATCCTCTTGTTCGTATTGGTGTGTGAGGACTTTCCCAACCCTCAAGAACTGCACATGATCAATGAGAACAACTTCTCCAAAGCTGGCTTGTCCGATGAATGCTGTCAGTTGATTAGTTGCTGTCTCCAGCAAAAGCCAGAGCAGCGGATTCAATTAAAAGAGATTCTTCTCCACAAATGGTTCAAGgacaCCAACCTGGAGAACTGAAGAACAGCCACCCTACATGTTATTGTCTTGAGAGGAACGTTTCAGGCTGTTTGAGGCAGGAAATCTTGAGCAGGAGGTGGCTCCtctcaaaacaaacaataaaacatatgcattaaTTGAA

Function

symbol description
pimr107 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in negative regulation of apoptotic process; protein autophosphorylation; and regulation of mitotic cell cycle. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000110845

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00069643 True 766 mRNA 0.46 4 13694950 13696012

Neighbor

gene id symbol gene type direction distance location
XLOC_035499 NA coding upstream 2944 13687104 ~ 13692006 (+)
XLOC_035498 NA coding upstream 97058 13518522 ~ 13597892 (+)
XLOC_035497 fut9d coding upstream 189464 13503377 ~ 13505486 (+)
XLOC_035496 jak3 coding upstream 282353 13389115 ~ 13412597 (+)
XLOC_035495 slc5a5 coding upstream 312599 13364950 ~ 13382351 (+)
XLOC_035501 lonrf1l coding downstream 4593 13700605 ~ 13788311 (+)
XLOC_035502 NA coding downstream 60001 13756013 ~ 13760915 (+)
XLOC_035503 NA coding downstream 98969 13794981 ~ 13799369 (+)
XLOC_035504 doc2d coding downstream 153987 13849999 ~ 13955872 (+)
XLOC_035505 CT025854.1 coding downstream 275405 13971417 ~ 14020139 (+)
XLOC_035489 NA non-coding upstream 631812 12766030 ~ 13063138 (+)
XLOC_035486 CR933523.1 non-coding upstream 1834806 11860028 ~ 11860144 (+)
XLOC_035485 NA non-coding upstream 1882786 11794658 ~ 11812164 (+)
XLOC_035506 NA non-coding downstream 306065 14002077 ~ 14006807 (+)
XLOC_035509 NA non-coding downstream 545573 14241585 ~ 14246353 (+)

Expression


Co-expression Network