G1682169


Basic Information

Item Value
gene id G1682169
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 29196652 ~ 29197180 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1924204
GGATAAGGTCTGATGTTATCCATCCCTACCCACTAAGTCATCCACTCCTCTGGATAAGGTCTGATGTTATCCATCCCTACCCACTAAGTCATCCACTCCTCTGGATAAGGTCTAATGTTATCCATCCCTACCCACTAAGTCATCCACTCCTCTGGATAAGGTCTGATGTTATCCATCCCTACCCACTAAGTCATCCACTCCTCTGGATAAGGTCTAATGTTATCCATCCCTACCCACTAAGTCATCCACTCCTCTGGATAAGGTCTGATGTTATCCATCCCTACCCACTAAGTCATCCACTCCTCTGGATAAGGTCTGATGTTAT

Function

NR:

description
PREDICTED: uncharacterized protein LOC106604077 isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1924204 True 325 lncRNA 0.46 2 29196652 29197180

Neighbor

gene id symbol gene type direction distance location
LOC110499307 NA coding upstream 260000 28892178 ~ 28936652 (+)
six3a six3 coding upstream 344324 28849051 ~ 28852328 (+)
camkmt camkmt coding upstream 451071 28548493 ~ 28745581 (+)
slc3a1 slc3a1 coding upstream 662064 28525469 ~ 28534588 (+)
ppm1ba ppm1b coding upstream 671559 28478800 ~ 28525093 (+)
LOC110499310 epas1 coding downstream 88705 29285885 ~ 29356101 (+)
trnaa-ugc-146 NA coding downstream 193140 29390320 ~ 29390393 (+)
ankrd1a LOC106589708 coding downstream 226514 29423694 ~ 29428859 (+)
lhcgr lhr coding downstream 240177 29437357 ~ 29458499 (+)
mertka LOC106589725 coding downstream 272851 29470031 ~ 29508296 (+)
G1682164 NA non-coding upstream 8060 29186781 ~ 29188592 (+)
G1682128 NA non-coding upstream 74124 29121845 ~ 29122528 (+)
G1682122 NA non-coding upstream 81407 29114854 ~ 29115245 (+)
G1682118 NA non-coding upstream 85399 29110719 ~ 29111253 (+)
G1682072 NA non-coding upstream 145760 29047310 ~ 29050892 (+)
G1682426 NA non-coding downstream 163553 29360733 ~ 29361016 (+)
G1682427 NA non-coding downstream 165656 29362836 ~ 29363209 (+)
G1682440 NA non-coding downstream 185216 29382396 ~ 29382601 (+)
G1682418 NA non-coding downstream 198635 29395815 ~ 29396294 (+)
G1682489 LOC106589727 non-coding downstream 344172 29541352 ~ 29543464 (+)
G1681792 NA other upstream 418243 28778006 ~ 28778409 (+)
G1681180 NA other upstream 470157 28717361 ~ 28726495 (+)
G1680230 NA other upstream 1820833 27375354 ~ 27375819 (+)
G1679823 NA other upstream 2109189 27084426 ~ 27087463 (+)
G1679135 NA other upstream 2420972 26700392 ~ 26775680 (+)
LOC110499316 LOC106589729 other downstream 375255 29572397 ~ 29588171 (+)
G1686317 LOC106589755 other downstream 3457174 32654354 ~ 32661648 (+)
LOC118942060 LOC106589768 other downstream 3980113 33177293 ~ 33196167 (+)
G1687675 NA other downstream 5128657 34325837 ~ 34326254 (+)

Expression


Co-expression Network