G1685807


Basic Information

Item Value
gene id G1685807
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 32501659 ~ 32501871 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1928240
CCATGgaggagttgttttcagcatggtggtggaaggtgtatgatcacaACCCCCATGAACGTATGGCCCTTCTCCAGGCAATGGCCTGTGGTGACATTCCAGCAGAGTCCTGTCAGGGGTGGATGTGTCATGCAAGGAAGATATTTCCCCCGCTGTCTGGCCAAGGAGAATATTGTCTGTGATGTTGATGAAAAACTGTGGCCGGACCAAAAC

Function

NR:

description
PREDICTED: uncharacterized protein LOC109203837

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1928240 True 213 lncRNA 0.51 1 32501659 32501871

Neighbor

gene id symbol gene type direction distance location
LOC110499334 LOC106589753 coding upstream 25494 32291265 ~ 32476165 (+)
kcnk1b kcnk1 coding upstream 239482 32245903 ~ 32262177 (+)
agpat4 LOC106589751 coding upstream 358195 32123986 ~ 32144750 (+)
thbs2a thbs2 coding upstream 428571 32034199 ~ 32073088 (+)
wdr27 wdr27 coding upstream 523585 31822760 ~ 31978074 (+)
LOC110499531 NA coding downstream 111087 32612958 ~ 32613933 (+)
LOC110499339 LOC106589759 coding downstream 188216 32690087 ~ 32702525 (+)
LOC110499338 LOC106589757 coding downstream 200920 32702791 ~ 32736730 (+)
LOC110499341 LOC106589760 coding downstream 245720 32747591 ~ 32760047 (+)
LOC110499344 LOC106589763 coding downstream 347826 32849697 ~ 32863389 (+)
G1685805 NA non-coding upstream 2644 32498807 ~ 32499015 (+)
G1685799 NA non-coding upstream 14027 32487396 ~ 32487632 (+)
G1685798 NA non-coding upstream 14510 32486915 ~ 32487149 (+)
G1685794 NA non-coding upstream 18589 32482861 ~ 32483070 (+)
G1685791 NA non-coding upstream 21055 32480270 ~ 32480604 (+)
G1685830 NA non-coding downstream 38311 32540182 ~ 32540614 (+)
G1686256 NA non-coding downstream 55338 32557209 ~ 32557429 (+)
G1686268 NA non-coding downstream 79665 32581536 ~ 32581881 (+)
G1686272 NA non-coding downstream 85236 32587107 ~ 32587532 (+)
G1686274 NA non-coding downstream 89038 32590909 ~ 32591522 (+)
LOC110499316 LOC106589729 other upstream 2925101 29572397 ~ 29588171 (+)
lhcgr lhr other upstream 3043738 29437357 ~ 29458499 (+)
G1681792 NA other upstream 3723250 28778006 ~ 28778409 (+)
G1681180 NA other upstream 3775164 28717361 ~ 28726495 (+)
G1680230 NA other upstream 5125840 27375354 ~ 27375819 (+)
G1686317 LOC106589755 other downstream 152483 32654354 ~ 32661648 (+)
LOC118942060 LOC106589768 other downstream 675422 33177293 ~ 33196167 (+)
G1687675 NA other downstream 1823966 34325837 ~ 34326254 (+)
LOC110499396 LOC106589821 other downstream 2879838 35381609 ~ 35384567 (+)
G1689347 NA other downstream 3179496 35681367 ~ 35682437 (+)

Expression


Co-expression Network