G1686518


Basic Information

Item Value
gene id G1686518
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 32847027 ~ 32847375 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1929044
GTTGTTGGTGTGTCTGATCCCTTGTTGCAGAATTGATGACACTGTCTCAGGAAAACAAACAGTGCGGGAAGCTGAAAGACAGTCACTCAACACAGATCACtgacccacagacacacagggcaACACAACATGTGAGCCACGCCAAAAGGTCCCCGCTAGAATTCAGCAGTGTGTTCTCGTGGTTGTATTCTATACCTCCCGTGGAATGtggttgtggctgtgtgtgtttgggcacacgtttgcgtgtgtgagtgtttggTGTCATTGTCTGACATCCGACACAGTCCCTGATAACCTGAAACCCAAATAAAATCACTCTATGAAACAAACAATATTTTCTTCATAATTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1929044 True 349 lncRNA 0.46 1 32847027 32847375

Neighbor

gene id symbol gene type direction distance location
LOC110499341 LOC106589760 coding upstream 86980 32747591 ~ 32760047 (+)
LOC110499338 LOC106589757 coding upstream 110297 32702791 ~ 32736730 (+)
LOC110499339 LOC106589759 coding upstream 144502 32690087 ~ 32702525 (+)
LOC110499531 NA coding upstream 233094 32612958 ~ 32613933 (+)
LOC110499334 LOC106589753 coding upstream 370862 32291265 ~ 32476165 (+)
LOC110499344 LOC106589763 coding downstream 2322 32849697 ~ 32863389 (+)
LOC110499532 hpse2 coding downstream 215660 33063035 ~ 33132825 (+)
LOC118942060 LOC106589768 coding downstream 337689 33177293 ~ 33196167 (+)
LOC110499352 LOC106589767 coding downstream 368897 33216272 ~ 33262134 (+)
LOC110499354 NA coding downstream 627565 33474940 ~ 33517443 (+)
G1686386 NA non-coding upstream 6089 32840300 ~ 32840938 (+)
G1686402 NA non-coding upstream 7987 32838574 ~ 32839040 (+)
G1686395 NA non-coding upstream 18459 32828145 ~ 32828568 (+)
G1686391 NA non-coding upstream 25722 32821032 ~ 32821305 (+)
G1686384 NA non-coding upstream 41440 32805332 ~ 32805587 (+)
G1686524 NA non-coding downstream 17517 32864892 ~ 32868963 (+)
G1686563 NA non-coding downstream 106914 32954289 ~ 33058087 (+)
G1686566 NA non-coding downstream 113484 32960859 ~ 32965536 (+)
G1686571 NA non-coding downstream 114407 32961782 ~ 32962946 (+)
G1686567 NA non-coding downstream 134692 32982067 ~ 32993118 (+)
G1686317 LOC106589755 other upstream 185379 32654354 ~ 32661648 (+)
LOC110499316 LOC106589729 other upstream 3270469 29572397 ~ 29588171 (+)
lhcgr lhr other upstream 3389106 29437357 ~ 29458499 (+)
G1681792 NA other upstream 4068618 28778006 ~ 28778409 (+)
G1681180 NA other upstream 4120532 28717361 ~ 28726495 (+)
G1687675 NA other downstream 1478462 34325837 ~ 34326254 (+)
LOC110499396 LOC106589821 other downstream 2534334 35381609 ~ 35384567 (+)
G1689347 NA other downstream 2833992 35681367 ~ 35682437 (+)
LOC118942012 LOC106589797 other downstream 2853845 35701200 ~ 35702156 (+)

Expression


Co-expression Network