XLOC_036038


Basic Information

Item Value
gene id XLOC_036038
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 51160606 ~ 51165849 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00072292
acaatataaataaattgcatcTTTTTTTGCCTGCAGTTACACATTAGCTCTTGTCAAGTTGTCTATGGTTTAGATgaatacatatttacatacatacatatgataAAATGCATAAACATGTATACCAAAGTCTTGTGTGGGAAGGCCGGTCAGGGTGAATAGATCAAGCATCCACTATTATGCTGAGGTAACTTCTcttctgtgttgttgttttgccCACAAAACACCATTTTTCAAACAGGAAGAAACAAGCAAGGCATTAAAATCATCAATGGGATGCGATTCGATTAGcgaaatgtacaaataaatgttCAGATATACTAAACTGAATATAGgcggacacacaaacacacaaagaatTGATGCGAAGAACTAGGATATACAAGTTAGCGCAAACTGCTGGCCGTACATTGAGCAAGTCGTTTGGTCACAGCACTCGAGGCTTGAGGTCAACCGATTGAAAGACGGAAGAAGGCATCACAGCAAATCAAACCCCGACCAAGTCAAAACAGCATCCCAAATCTTCAAATCTGCCGTCTTAAAAGGATTCGCTGGGGAGTACATGACAATCAGATATGCTGAACCTGAGATTTGTAAGAGCTTTTAGGTAAACCCACGAAGGCAAACGGGTGTGAAATGATATCAACCAATGAAACGCAGGAGGACTAAAAAGTCTAGAAGAGATGCCAACTTCATGAAGATGATCCTGGAAACACTTCAGATCTAATAATCGGCCCTGGAGAGCTCAAAACTCGGTACTATCCCACATCTAACACTGTTTTTCTCCCTGCTAAAACTGGACTTCAATGGAGACAGAGCAGTTCCTCTGGGCGCAGTTGAAATAGCACCATCCCACCACTCTACCACATGCTGAGGTACAGTACTGGCGCTTTTTTCCCCTCGCCAACTGTGTTAAAACAACATCTATCTAGCAATGGGGCTTCTGGAGactggttaaaaaatacaatCCCTTCTAGAGTTAACTCTATATCATAGCAGGTGGTGTAAAAATGGACCTCAGTCAGAGTTGGCGCCATATTTAATGCGATAAGTTGACGGCTTCGCTTATCGAAAAGTTGTGTACTCACCATGGTATCATTCCATCCATTCTTACTTCGATGTAAAACGAAAGGTTGGTGTTTGGACATACTATGAATCGACAGGGACCAAAGTGATGTTTTTGACCAAAGCAAATTCCATTATATGAACGGAACTATTCGCAATTGCGAATGACATGAGGTTAGCAAAAGTACTTAATTGTTTACCTCATAATCCTAAAGAGTAATTCTGATGGGAAGCTTACATTTTTTGTCGCATAAATGATTGATGCTTTTTGATTATAACGTTTATACGGGTTTTTCAGCGATATCgtacagcaattcgtaactttttgatttagtggctaattcgtttttattcgtacaatctcattcaaaCAATTTTAGTATGTTTTGCTTATGCCcgaatgatggttgggttttggggcggggttgggtgccacacctccttttaaaattcgtacatttttgtatgtctgaactcgtacgaattcatacgaattagccaataaactgaacaaacataaaataggtacctcgtgagatcaggctgggttttTTGGtaactttacttgaagggggtgttgataagactgtcatgaaccctttataatcatgacatgacacacaGCATGAATATGAACGAGAAGCCGTTGTATCATTCACTCGGTTATGTCATTTGAAATGCAATATGACattgtttgagatgtcttcaTGTTAAAATgcatgtcataaatctgtcataaacatgactgtcatgaaACCATTATGATTGCTATTATAATGCCgagttcacaccagacatggcaCGCGCAAATAGATCACGCTATTAGCACATAAATAGACgcttgaacattttgagtttactcgcttcattcatgcGTCAAATTCTCTTCACAATAGACGCGGGGCTTCTGTTTGCTTGATGACTCTAGCTTcaatgctaaatggctaacatggattttactgAGATAGTAGaggctttatgtgctttaggaaggctgaaaaacatcaTAGATTCGTTCGccgtctgagtccactagatcctgatttcagaggtgcacccagctctgagtTCATCCACTCCTCCATAAACAGGACCTGCATGATGCTTCACACTGAGCTGTTGTCCAGTATCGGCAGAAGGATTTTCCCCTCGGGataccaacaacaggcgctacatcataatcacttCCCTACAAGAGCAAGCCCGTGATTGGGTAATGCGGCGTGAACGTCTGTTAAAGTTACGCTTTTTTTGACTTTCAAGATTTTCAACAACTTTTTCAAAACGCAAATCTCATTTGCACGAATCGCGTCATTCATGCGTCATTCGCATCATGCACCATAGAAAGTCTATTCGTGTATTTGCAATGACCTAACATGTGAATCCCTCGCGCTTGACGCTTcatctgtgtctggtgtgaacgcagcattaagcTATTAATGTtttcttgacctcaactacagtgttaataatttaatgtcattaaaatgtcattattgtTAATGGCACATATGTTTGGTCAAAGTGTTGACACGTTtaataagacattttaatgaTGTCCATTCAGttccactggaaaaaaaaagtgatcagaaaaatagTCATGACACACTTATAATCGCTTCATGAcgattatgtttatgacagatttatgacaggtcTTGGttaaagttgtcatgacaaagacatctAAAATGACAAAACTAAGCGAATGAGACAGTTgttataaaaatgcttaaaatctCAATCATATTCATCATGTCATGGCACCCCCTTCAAGTGATAATTATTTTTACTGCCACTATAGGGCCTATAGTTCAGTAAATAAACTCTATTCGAATAAATTCTAATATAAAAAGTGTTACTAAATCtggtagttcacctaaaaaaaaaatcacgtctTTCTTTCCTTCATTCCCTCTCTGAAAAATACTTCCAGAGATTTGTTTTGCCCACACAATGAAAGTCACCAGGGTCGATCATTATGTCGTTTCGGACCCCTCTTGACTTTGACTACAAGGGCAACATAGCTTCTTTTGTGATTTGCGAAGATAAGTAAGTCATGCAGGTCTGGAATGACACGAGGGGGAGGTAAACCATGACTGAATCTTCATTTCATGGTCAAAGCAACTctttgtgtggtttattcataaactaatttcgagaggatcacgtgcttataatcaacacggctggctccttgttagctccgtaatcagccctattagatgattagggaagcattataaatagcctgagtttttcactccagttatcttcgtcttgaagctccacCCCTTTCTacccctacatcctccccctttttctgatcgggcgacacggtggtccagtggctagcactgttgcctcacagcaagaacaccgccggtccaaccCCATCGGGCGgtctggtgtttctgtgtggagtttacatgttctccccgtgttcgcatgggttttccccgggttccccggtttcctcccaccgtccaaaaacataaaccacagccaatcgactaaaacaaattatcacccaatacaaccttagtTTAAACTTCTCACgttgacaagcaggggagttctcaagacctacctgacctcgaattcccctctcgcccttctaacgggagggagccccgggctcgaggatattacgagctcagggctctctcccgggacagcatgccaaatacgatttattgattatcagctaagtgtgaactcttgaataggtCTACAGGTAATTCTACTTTTTTAGGAGTCTACCCTGACTGAGGCCCGGTTTCATACtgttttgcaaaacaactagAAATTGTGCGATAAAAGATGCTAAAAAAAAGCTGGGATTAAAAGAAAACAGCATTGGGAATTCAGGACAAAAGAACGCCTATCCTGCCTGATTTGTGACGAGGAAGGCAGCACATAATCAGGACCTTAAAAAAAGAAGTATAGACAACATatcattctgtttttgtttttttttaaagcagaagcaATTAACATCCATCAGACATGGGCCACACTTTGTTTATAAGTCTTTTAATATGATAACTGTTTCTGGAAAACCTCCTAGAGATTGATCATTTCGTTGGGGGGGGGCAGGGAACCTTCTGGACTACTGGCCAGGGAAATAGCGGGTTATCATTACAAATGCTGGTGCCACCATCACGTCCACATTTCCTTCAAGCTGTACCACATGCATCTCTTTGACATACAGTGTCATTTGCTCAAGTGACGACACAGGAACTGGCCCACGGTGGCCATCATGAACAAGGCAATGAAGAGTCAAGAAGAGACGGTTGTTTCCCCACAGCGCTGCAGTGAATCTCTCCATTCAACGTTGGAAACTTGCGTCCCGAATGCCCCTTTCTCCCTTCCTACTATTTGAGTTTGGTTGACCGGTTGGTTCTCCTGCGGGAGTTCCTTCGTGTATGCACTCTCGGCTCATGAAAAGGCGACAAGTGGGATTCTAGTAACCAGATCAGCTATG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00072292 True 4555 lncRNA 0.41 2 51160606 51165849

Neighbor

gene id symbol gene type direction distance location
XLOC_036037 DISP3 coding upstream 13012 51050554 ~ 51147594 (+)
XLOC_036036 si:dkey-32e23.4 coding upstream 133065 50979018 ~ 51027541 (+)
XLOC_036035 CR855300.1 coding upstream 192607 50966806 ~ 50967999 (+)
XLOC_036034 NA coding upstream 197717 50953776 ~ 50962889 (+)
XLOC_036033 b2ml coding upstream 210057 50942240 ~ 50950549 (+)
XLOC_036039 NA coding downstream 415880 51581729 ~ 51586703 (+)
XLOC_036040 klhl22 coding downstream 541932 51707781 ~ 51726902 (+)
XLOC_036041 NA coding downstream 609573 51775422 ~ 51778591 (+)
XLOC_036042 gna14a coding downstream 793119 51958968 ~ 51986997 (+)
XLOC_036043 FQ790367.1 coding downstream 996012 52161861 ~ 52162964 (+)
XLOC_036030 NA non-coding upstream 454954 50531703 ~ 50705652 (+)
XLOC_036029 NA non-coding upstream 646573 50508918 ~ 50514033 (+)
XLOC_036027 NA non-coding upstream 887128 50256786 ~ 50273478 (+)
XLOC_036024 NA non-coding upstream 1118791 50038691 ~ 50041815 (+)
XLOC_036053 NA non-coding downstream 1431539 52597388 ~ 52604066 (+)
XLOC_036056 NA non-coding downstream 1485302 52651151 ~ 52652449 (+)

Expression


Co-expression Network