XLOC_036040 (klhl22)


Basic Information

Item Value
gene id XLOC_036040
gene name klhl22
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 51707781 ~ 51726902 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00070559
CACGGAGAAACTCAACTGGCGTTCAAAAATCAAAACATCCCGAAACGTCCTCGTCGTTTTCATATTAATATTCATCATTATCATCGAGTGACTGCAGTCATTAAACAGCTTGTTTTCGCCGTCAGACCTTTTCTGCATTGGTGTGGAATTACGCACAAAAATGTGAGCAGGTTCACTTTCTGTTTGCATTATTGTGTCAAGATGGCTGATGATTTGGTCTCCTGCACGGCTGGAGGGGCCGTTCGCTCCGCTCAGCCTTGTGCCAAGCAGAAATATCGCAGCACCGCCCACTCACAGGGGCTGTTAGATGGGCTGCTTATGCTGCGACAAGGTGGTATTCTGTTTGACGTGGTGCTCTTGGTGGAAGGAAAACCCATCCAGGCTCACCGAATTCTCCTGGCGGCGTCGTGTGACTATTTCAGGGGCATGTTTGCAGGTGGTTTGCGGGAGATGCAGCAGACTGAGATCCCTGTTCATGGGGTTTCATACACGGCCATGATGAAGCTGCTGGACTTCATCTACACCTCGGAGCTGGAGCTGGACTTGGACACGGTGCAGGAGGTGCTGTGTGCCGCCACGCTGCTGCAGGTCCAAGATGTGATCGGCTTCTGCTGCGACTTCTTGTTCTCCTGGCTGGACGATGACAACATCCTGGAGGTGGAGAAGCTGGCCGACATCTACGGGCTCCACCAGCTGGGGGAAAAGATTCGCTCATATCTGCTGAAGAACATCCAGACGTTTTCACGCACGCCGGTGTATCGGAAACTACCTGCAGAAAAGGTGTTGAGTGTGCTTTGTAGTAACGAGCTGGAAGTGGACTCGGAGAACGAGGTGTACGAAGCCGCACTTCACTACCATTACACTCCCGAACAGGTGGAGAAAGACCAGGTTTGCTTACAGGAACCGCTGCGGATGTTGGAGGCGGTGCGGTTCTGTCTGATGGAGAAGCACGTTTTGCAGCGTTTGCACAGTCGGTTAAAGCAGTGCCCGCTGCGGGACTCGGTGGCTGCCGCTCTGCGTTACCACAGTCAGGAGCTTTGGCAGCCGGTGATGCAAACCCCGCTCACTCTGCCCCGCTGCAGCTcccagtgcattgtgggatttgGTGGCATGTATGCATCGAGTGCGCTGGTGGACAATGAAGAGCGCTTTCAGGTCTTCCACCCATCCTGGAGCGAGTGGCGGAGCCTGGCGGCAGAGCGCGCTCCGCGCATGTCCAACATGGGCATCGCTGTGCTCAATAACTTTGTGTATTTAATCGGCGGGGACAAAAACACCAGCGGCTTCCGGGCTGAAGCTCGATGCTGGAGGTACGATCCTCGCCAAAACAGCTGGTGTACAGTGGAGTCTCTCCGGCAGCAGCACGCGGATCATTGCGTCTGTGTGGTCGATAAATACATCTACGCCATCGGAGGACGAGACTACACCAATGAGCTGGACTGTGTGGAGAGATACAACCCACAGACCAACACATGGGAGTTCATGGCGCCGCTCAAACGAGAGGTCTATGCTCATGCTGGCGCAGTGATTGATGGGAAGATCTACATATCGTGCGGCCGGCGGGGAATGGCGTATCTGAAGGAGACGTACTGTTATGATCCCGGCAGTAATCATTGGAGTGTGTGTGCTGAGGGTCCGGTGGAACGAGCCTGGCATGGCATGGCAGCCCTCAACGAGCGGGCTTACGTAATGGGAGGAAGCAACGATAGCTGCGGATACAGAAGAGACGTACTGAAGGTGGCGTGTTATAACCCAACAGCAGATGTGTGGTCAGTGGTCAGTCCACTGCCAGCAGGACATGGAGAGCCCGGTACTGCCGTCCTCGATGGTCGCATCTACATTCTGGGTGGACGGTCGCATGATAAAGGCAGTCGAATGAAGTACGTCCACATTTATCATGCGGACGAGGACCGATGGGAGAGCGGCACGGCTCTGGAGGACCGCGTATCCGGACTTTCAGCCTGTGTGCTGCTTTTGCCTCGAGCAGCAATGGCTCAGGCTCACAGTTGGGAGCAAAGAGCCAAAGCATCATGGGAAGAGGTGGACTGGGACGACTCGGACAACTCCAGCGAAGACTAATGGCATTAGCGCAGCTCAGGTAGGCCAGAAAAATCACAAAGTGAGGGAAAGACAGGCTTTATGACCTTGGAGAGTATTTAAAATTCCACTGATCTTGAATGGGTCACGTTTTGGGGGCGTTTtagtttgattattattattgaaaagcGGTAGCCGTGTTTCCATGCAAAGATGCGAATTACATTTGGAATAATGCATGAAAtatttgcgaataaagcagcgtttttatcaaATTAGTCAAAAAGGAGGAGGGCCGGAGCAGGGGGTAGCGCTGtagcctcactgcaagaaggtcgcaggttcgagcctctgATGGTGGTTGAGTTTGCAGCTGAATATTATTCAAGTCAAGTcatgttaaaatttatttataaagtgctttttaaaacaacaagtgcttaccaaagtgctgtacactagagatgcgcggatggcggttacagctgcggataaaccgcggatggggcggatgacgtgacgaaaaattaaattttaattatattcgggcgggtggtgggcggttgtactgtttttgtacacatagctggcgcaccaacgaaaaagcctaggactgacttcacagaatgagagaaggaatcggatacactaattctggatgaagtacagaagtattcctttacaaacttccgtatagacggatcagcagaggaaaatctactttccttttaggagaaacaaggcagtcattcccacgactacagctccttgccaagagaattctatgcattccagcaacaagtgctgcgagcgagcgctccttcagcgCAGCCGGGCGCATTGAGGCCATgcgctctcgtctgaatgttgaaatgatgtgtcaaaatgcgttttctattaggctacaataatagtaaaaaaattgtacagtacagtccatttaatttaggctatttatttatttttgtccctgtgcgccaattggagacggagttcactgctgatattctgagagctttataggggtgcttctcatttcttatttgtgtatcctcgtttcctttccttgctttctttcctcgtctttccacccctataggatgcgagggtaggacgcaaggaaaagactaaAGGACCGAGGAATTGAATCAAATGAAACGGcacgtcctcgtattgtttagcttcacttcaaagcgtcaattaatgcTGCATTGACTTGCACGTTTGAATTAACTacatgtcattaaagtcattgtctattttctaataatcaataaagaaacattcatttaataataaaaaggaataagccattcaaataaagagctcagtcagcagatggcgggcgggtgcggttttaaaatttggtcgaaaatgttagtgcggatggatggcggacggatgatgagttttgtgatgcggttgcggatgaaataatagcccatccgcgcatctctactgtacacacatacaccatcTAAAACAAAGGACTAATACAACAGACACATGACTCTCATATGGTATTAAAAGCCAAAGAGTAAAAGTGGGTTTTAagactagatttaaaaacagaaagggtTGCGGCCTGCCTAACATGGGGAGGCAAATTAGGCCCCGTTCACACAAGTGCGTTTTAGTTTCAAAAcaaaacgatctgcgtccacactagcgtttcacctagcgtttctgaacatatgtccgtccacactacgccaccaaaaacgtatatcacgtgaccattcgcacactctgggcatgagcgttctagtataaacaggaagcatgcgtctcgctcgacatttggttattgttagtcaacaaacgccggttgaacaatgaacgcgatggcaaagaaagcaagagaggtatttttgtggacagacgacgaggtcgagttgtactaaacgtaacaaatgaataactacacaatggcacctaaaacagacaatagtgcaaacaacgctcccatgtctgtgtccgtgttgttgtttacagtgaaggctggtctgctgtcttccagtagcgttaaagccatgtgttatagtcatgtgataggggcttgacgaataagggaaggatacgcaatggcacaaaagccccaatcaggtagcgaatctcagcagccccgcctccgtttacagatgtctccgttttctcccatccacactgagacagagcagcagcatttccgaatgaaaacggcctcttcagcgtttccaaaacgctccgttttctgcgctcgaaaactccggcgtaaccgtagcaaaacttatgcgttttcaaactaaaacgcattagtgtaaacggtgacgcagtggcgcagtgggtagtgcggtttgcctcacagcaagaaggttgctgggttgttggttcgagctatgactgggtcagttggcgtttctgtgtggagttagcttGTTCTCCGGTGTTctttggtgctccggtttcccccactgtccaaagacatgcagtacaggtgaattggttaaattGTCTAAATTAAATTGTCTAAAAATtaaattggctaaattgtccgtagtgtacgagtcagtgtgtgtgtgaatgagtgtgtgtgtggatgtttccaagagatgggttgcggctggaagggtatccgctgcgtaaaaacttgctggataagttggctgggcgactccggattaataaagggactaagccgaaaagaaaacaaatgaatgagttgacacaaaaatacacaagaagagactttcacttcacgcatagtttgtgaatgaacagacttgCGTGTACGAGTTGCAGATGTGGTTATGAGGCTGAATTTGAAGTAATCAATCAGAGAACAGAAGAAAGTGTATTACTTTGATAATTTAATATGGCATATTATTAATGAAATTCCAAAATTAtagtataatttttattattaatttctggggattaattatttgttaatttctCGCGGCCCACCAGCAGGATCGCTGAAGCCCACCGGTGGAGAATCCCTGATCTAGGCGTTTCCATAAAGCAGATTTTCATGTGATATtctaaaatgcgcataaaaattggtggatggaaacatagctatcgTGTGTTACCTAGAAGTCTTGAATTTAGCCAGAAGGTTGAATTTATTACAATGCATTAATTGTTGCTACCACTGTAACTGAAGGTAAGTTGGAAATGTTTGGGTTTAGATTATCTCCAAATTCTTCTTTTTCCTGTTTGTGGGTTAAATGTACGGACTcgtttttgtttcgttttgtctTTACATCCGAATCTTCGTTCGGAGTTATGGGAAACGGGGATGCAAACACTGTACATGCACTTTACAAATGCAAACGATTTGATTTTGTTGACAGTGCCTTTATTTTACAGATGTGTTTTGGTAAGTCCGATGCCTTTTTTTATTAAGAGATTTGAATTTAGTGCAATACTGTTTTTCAGAATGACAGAATTGTTGAATAGGATTCGGTGTTCAGTGGTTGGCAACCTTCAGAGTGAAAATAGTATGTATAATATAGATTATATatcaatattattcatatttgaGATGTTGAAGTCAGACACTCCAGCAAATGTAACTAAAAAGGATTGAACTATAGTTTATGAAAGTGGggaggcatggtggctcagtggttagcactgtcgcttcacagcaagaaggtcgctggttcgactccctactgggtcagttggcatttctgtgtggagtttgcatgttctcccagtgttggcgtgggtttcctccgggtgctccggtttccccacacagTCCGAAAACAGTCTCTTTaagagaattgaataaactaaattggccgtagtgtgcatgtgaatgagtgtgtatagatgtttcctagtactgggttgcagctggaagggcattcgctgtgtaaaacatatgctagataagttggcggttcattccgctgtggtgaccctagatgaataaagagactaagccaaaggaaaaagaaaaaatgaataaatatatatatatatatatatatatatatatatatatatatatatatatatatattagtccaTATTTGAGATGTTTAAGTTAGAGACTGATATGAACAAATCCTGAACCATCTGaaccaaataatacaaataacgtGTATGTTTTCAAGCGTCCAAAGACACCTTTTAATGTAGTTTATTctcatatatttataaaatatatgaaaaaaataacaatcttTAATTTTTTACCATGATTAACAGAACGTCAATTGGTTCCAAACTATTTTACAATTCTTTTTTtctactaaagaagatattttgtagaaagctgaaaacctgtaaccattgacttccattgaattaaaaaaaataataatcctacatttaccatgatttacagaatGTCATGCAGTGTAAATCGTGTCTTCTAAGGCATATTTACAACAATGAAGGCATTTTAAAAGCTATTTATTGACAGTTTCACATTTTGGccacaaaatatttattattaccattttcaGCCTTTATATTTGTCTTCCAAACAATAGATGGGTCTTGATTTCATATTTCGTATGCTCAATTTGTTGTACAGAagttatttgaataaataaattaggcaCTTTACTGGCATTTAATAGCCTCTATGTCACttacctatttttattattacacaaaGGATATTTCTCATCTTTGACCCCCATACAATTATTAAAAGATGGAAAACAGATTGGGAAAATCaatataaatgtattcaaatagcACTTAATTAAAATTGCACTTAATGTCAGAAACGTTGCCGACTGCTGCACTGAATACTGAATTACTGATATTACTGagattatatatataatgttgagTTGCTCGTTGCTCCAAACAGGAATCCATGAAAATTGGCAAAAGCTACGTTCAGTTAATTGAGCTCTTTTAACACATCTGATGGCTTCTGCTATGTAAAAAGCGCTCCTGTGTACTTCGAAACTGAATGTCATGCACTGAAATAAACACTTCTTACTTTGCTTTTAGCTTTGTTTATTTACTGCCTTCAGTGTATAATATGTATTGCCTCTTTAAGTTGAATCTTGTTGACCCTGTTGAATGTCAAAATCAAAAAATGTAATCATtgattttcttaatttttaataaaaggaTATGCAGAATAGTTG
>TCONS_00072295
CACCTTTTAATGTAGTTTATTctcatatatttataaaatatatgaaaaaaataacaatcttTAATTTTTTACCATGATTAACAGAACGTCAATTGGTTCCAAACTATTTTACAATTCTTTTTTtctactaaagaagatattttgtagaaagctgaaaacctgtaaccattgacttccattgaattaaaaaaaataataatcctacatttaccatgatttacagaatGTCATGCAGTGTAAATCGTGTCTTCTAAGGCATATTTACAACAATGAAGGCATTTTAAAAGCTATTTATTGACAGTTTCACATTTTGGccacaaaatatttattattaccattttcaGCCTTTATATTTGTCTTCCAAACAATAGATGGGTCTTGATTTCATATTTCGTATGCTCAATTTGTTGTACAGAagttatttgaataaataaattaggcaCTTTACTGGCATTTAATAGCCTCTATGTCACttacctatttttattattacacaaaGGATATTTCTCATCTTTGACCCCCATACAATTATTAAAAGATGGAAAACAGATTGGGAAAATCaatataaatgtattcaaatagcACTTAATTAAAATTGCACTTAATGTCAGAAACGTTGCCGACTGCTGCACTGAATACTGAATTACTGATATTACTGagattatatatataatgttgagTTGCTCGTTGCTCCAAACAGGAATCCATGAAAATTGGCAAAAGCTACGTTCAGTTAATTGAGCTCTTTTAACACATCTGATGGCTTCTGCTATGTAAAAAGCGCTCCTGTGTACTTCGAAACTGAATGTCATGCACTGAAATAAACACTTCTTACTTTGCTTTTAGCTTTGTTTATTTACTGCCTTCAGTGTATAATATGTATTGCCTCTTTAAGTTGAATCTTGTTGACCCTGTTGAATGTCAAAATCAAAAAATGTAATCATtgattttcttaatttttaataaaaggaTATGCAGAATAgttaaagaa

Function

symbol description
klhl22 Predicted to act upstream of or within cell division and protein monoubiquitination. Predicted to be located in several cellular components, including cytosol; lysosome; and microtubule cytoskeleton. Predicted to be part of Cul3-RING ubiquitin ligase complex. Orthologous to human KLHL22 (kelch like family member 22).

GO:

id name namespace
GO:0051301 cell division biological_process
GO:0006513 protein monoubiquitination biological_process
GO:0031463 Cul3-RING ubiquitin ligase complex cellular_component

KEGG:

id description
ko04121 Ubiquitin system

ZFIN:

id description
ZDB-GENE-081104-154 Predicted to act upstream of or within cell division and protein monoubiquitination. Predicted to be located in several cellular components, including cytosol; lysosome; and microtubule cytoskeleton. Predicted to be part of Cul3-RING ubiquitin ligase complex. Orthologous to human KLHL22 (kelch like family member 22).

Ensembl:

ensembl_id ENSDARG00000088807

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00070559 False 7145 mRNA 0.44 7 51707781 51726631
TCONS_00072295 True 991 lncRNA 0.29 2 51725646 51726902

Neighbor

gene id symbol gene type direction distance location
XLOC_036039 NA coding upstream 121078 51581729 ~ 51586703 (+)
XLOC_036038 NA coding upstream 541932 51160606 ~ 51165849 (+)
XLOC_036037 DISP3 coding upstream 560187 51050554 ~ 51147594 (+)
XLOC_036036 si:dkey-32e23.4 coding upstream 680240 50979018 ~ 51027541 (+)
XLOC_036035 CR855300.1 coding upstream 739782 50966806 ~ 50967999 (+)
XLOC_036041 NA coding downstream 48520 51775422 ~ 51778591 (+)
XLOC_036042 gna14a coding downstream 232066 51958968 ~ 51986997 (+)
XLOC_036043 FQ790367.1 coding downstream 434959 52161861 ~ 52162964 (+)
XLOC_036044 ube2d4 coding downstream 557173 52284075 ~ 52297799 (+)
XLOC_036045 dbnlb coding downstream 587640 52314542 ~ 52350684 (+)
XLOC_036030 NA non-coding upstream 1002129 50531703 ~ 50705652 (+)
XLOC_036029 NA non-coding upstream 1193748 50508918 ~ 50514033 (+)
XLOC_036053 NA non-coding downstream 870486 52597388 ~ 52604066 (+)
XLOC_036056 NA non-coding downstream 924249 52651151 ~ 52652449 (+)
XLOC_036058 NA non-coding downstream 1040553 52767455 ~ 52780637 (+)

Expression


Co-expression Network