XLOC_036058


Basic Information

Item Value
gene id XLOC_036058
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 52767455 ~ 52780637 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00072306
GATTGTGGGAGGATCAGGCCCCAGAGCTTCACAATGCCTGCCTTTCTTTCACATTCAGGTGCGACAAAGCAGGTATGCTCAAAAAGCCCTAATCCCACATTCAGGACAACAGGGCGCTTTCACACAGGAAGGAGGAGCGTTTGTGTTTCAGAGATCATATGAAGCGGCGGCGGCGCTCGTCTTCTGGGAAGATCTGCGCTTCTTTGTCTCTGTGTTTGACGTGCTCATGCCATTGATAGAGCGCTGGGGTTGCCATGGCCTGCGGTGCATGTGGAGGAGAGGAGGCCAGAGAAAAGGGCTTGTCACTGGATTTAAGTGTAATGTTGAGGGAAGGAAGATAAATGCCTGTGTGGCTTTGTTCGCTCTGGATGCAGG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00072306 True 375 lncRNA 0.52 2 52767455 52780637

Neighbor

gene id symbol gene type direction distance location
XLOC_036057 bcl2l16 coding upstream 51139 52701811 ~ 52716316 (+)
XLOC_036056 NA coding upstream 115006 52651151 ~ 52652449 (+)
XLOC_036055 si:dkey-90l8.3 coding upstream 119665 52637507 ~ 52647790 (+)
XLOC_036054 ccn1l2 coding upstream 136391 52619365 ~ 52631064 (+)
XLOC_036053 NA coding upstream 163389 52597388 ~ 52604066 (+)
XLOC_036059 adgrd2 coding downstream 8360 52788997 ~ 52826181 (+)
XLOC_036060 NA coding downstream 98788 52879425 ~ 52887683 (+)
XLOC_036061 NA coding downstream 216903 52997540 ~ 53028669 (+)
XLOC_036062 NA coding downstream 236440 53017077 ~ 53017557 (+)
XLOC_036063 NA coding downstream 237539 53018176 ~ 53019480 (+)
XLOC_036043 FQ790367.1 non-coding upstream 604491 52161861 ~ 52162964 (+)
XLOC_036041 NA non-coding upstream 988864 51775422 ~ 51778591 (+)
XLOC_036039 NA non-coding upstream 1180752 51581729 ~ 51586703 (+)
XLOC_036064 dre-mir-181a-2 non-coding downstream 242902 53023539 ~ 53023617 (+)

Expression


Co-expression Network