LOC110500862 (LOC106608740)


Basic Information

Item Value
gene id LOC110500862
gene name LOC106608740
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 45053322 ~ 45066445 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110500862
ATGGCGAGAACCTTCCTACCAGCTCTACTGCTCTATGGATTGAGTTTGGTCTCTGTGTTGGTTTCTCAGTGTCAGACTATGATGGTCCGTACTGGGGATACCATCACCTTGCAGTGTTCCAATGTTACAACGGCTGTGGGACACACAGCATGGTTCAAGCAAGTCAACGGATCAGAGCCTGTGTGTATCACGTCTATTCTAGTAGGAGAGGATGATGACATATACCTAGGAGAGGATGATGGAACCATGTACCTCCTTCCCCTGGTTGTGATCCTGGCTGTTGTGACTGCTGTTCTACTGATAGTCATTCTCATCCTGGTCCTCAAGATCAGACGAGACTCAAACAGACCCAACACAGCTTTGACAGTTTGTGCTTTCACCAAACCAAACGTAATCCAACCAACACCTGTGATGGTTGCTGAGCTGGGAGGCTCTGTGACTCTCACTTGCTTTTGTCCTAATGTGTCGGTGACCAGGTTTGATTGGTTCAAGCAGAGTTTTGGACAGGAACCCCTCCTCATGGCATCATCTCTTTATGTTGGCAAAGATAGTTATTATTCCAACAACTTTATCAAGGACTTTACTGAGACCGAACGTTTGGgtatgaggagaggagaatacAGCTGTAACTTGACCATATCCAAGACAGAGCCAGGGGACTCAGCTACATACTATTGTTCCACTGCAGACATCTATGAGCAAACATTTGGAGACGGAACTGTTTTATTTGTCAAAGACTCAGAGTCCAACAGCATATCTGTGCTCCAGCAGCCTGTGTCTGAGTCAGTCCAGCCAGGAGACTCTGTGACTCTGAACTGTACAATACACACTGAGACCTGTGCAGGAGAACAGTGTCTATCGGTTCAGACATGGCTCAGGAGAATCCTGCTCATGAATCATTTACACACATGGAGACAGGAGTGATCAGTGTGAGAAGAGCTCTGAGGCTGCGTCTCCTACACAGAGCTGTGTCTACAACCTCCCCAAGAGGAACCTCACACCCGCTGGGACTTACTACTGTGCTGTGGGCTCATGTGGGGAGATACTGTTTGGAGATGGGACCAAGCTGGACATTGACCATGGTTGTAAGGAGGACCATCTTCTGTTCATGTATTGCCTTGGCGTAGCGTTGGGTCTGTGTGTCCTCCTCATCATTGTCCTTACTTGTGTTTTGTACAAGATGAGCAAGTGCATAGGTAAGCGACAATATTGTGCAAGGTCCAGTATGCTTATCAATTGTTGGAGTGATCAGTGTGAGAAGAACAATGAGGCTGGGTCTCCTACACAGAGCTGTGTCTACAATCTGCCCAAGTGGAACCACAGCCTTTCTGATGCTGGgactactgtgctgtggcctcgTGGGGAGATACTGTTTGGGAACGGGATCAAGCTGGATGTTGAGTGTGGTGGACTTTTTCCACTCAAGACAAGTTGTGAGGAGGATGACAACTTCAAAGAGGATCACACTGTGTCTGATATTTCCACTTCTTGTAGAGATGGACATGGCTCAGGAGAATCCCATCCAGAAATAATTTACACCCATGGAGACAGGAGTGATCAGTGTGAGAAGAGTTTTGAGAATGGGTCTCCTACACAGAGCTGTGTCTACAACCTCCCCAAGAGGAACCTCAGCTTCTCTGATGCTGGTACTTACTACTGTGCTGTGCCTCATGTGGGGTGATACTGTCTGGGAATGGGACCAAGCTGAACATTCAAGTTCCAGAGCATCATCCTCCATTTGATCTGAGTCCTACTGTTCTGGCCTTGGTCATCTCCAACATCGTTCTGGGGATAGTGACCCTTCTACTTGTCTGGGCGCTGTGCAAGACTCAGAACAGAGATAGCAGAGGAGAATTGAAACACTAtatagttgtcacgccctga

Function

NR:

description
fibroblast growth factor receptor 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110500862 True 1884 mRNA 0.48 11 45053322 45066445

Neighbor

gene id symbol gene type direction distance location
LOC110500859 LOC106608737 coding upstream 34553 45015116 ~ 45018769 (+)
LOC110500539 LOC106608730 coding upstream 184644 44863195 ~ 44868678 (+)
ponzr6 LOC106608790 coding upstream 190571 44861211 ~ 44862751 (+)
LOC110500538 LOC106608727 coding upstream 245568 44804798 ~ 44807754 (+)
LOC118942934 NA coding upstream 257032 44789670 ~ 44796290 (+)
LOC118942935 LOC106608740 coding downstream 7342 45073787 ~ 45074436 (+)
dock11 dock11 coding downstream 181130 45247575 ~ 45359292 (+)
il13ra1 i13r2 coding downstream 293059 45359504 ~ 45368212 (+)
trnar-ucu-9 NA coding downstream 311564 45378009 ~ 45378082 (+)
kirrel1a LOC106608745 coding downstream 312865 45379310 ~ 45419173 (+)
G1742167 NA non-coding upstream 7677 45042866 ~ 45045645 (+)
G1742156 NA non-coding upstream 24674 45026746 ~ 45028648 (+)
G1742029 NA non-coding upstream 213775 44837922 ~ 44839547 (+)
G1741973 NA non-coding upstream 228754 44818362 ~ 44824568 (+)
G1742012 NA non-coding upstream 252363 44800551 ~ 44800959 (+)
G1742298 NA non-coding downstream 164091 45230536 ~ 45244176 (+)
G1742308 NA non-coding downstream 196785 45263230 ~ 45263614 (+)
G1742371 NA non-coding downstream 355852 45422297 ~ 45426947 (+)
G1742379 NA non-coding downstream 414030 45480475 ~ 45521688 (+)
LOC110500529 LOC106608720 other upstream 580758 44461338 ~ 44480565 (+)
LOC110500528 tmem256 other upstream 601790 44446186 ~ 44451532 (+)
G1740752 NA other upstream 840092 44212786 ~ 44213230 (+)
G1740453 NA other upstream 1526596 43524736 ~ 43526726 (+)
G1740412 LOC106608825 other upstream 1582997 43469818 ~ 43470325 (+)
fcer1g LOC106608748 other downstream 378082 45444361 ~ 45449712 (+)
LOC110500870 LOC106608752 other downstream 418827 45485247 ~ 45517233 (+)
si:dkey-38p12.3 LOC106608755 other downstream 482672 45544516 ~ 45565742 (+)
G1743043 NA other downstream 572851 45639296 ~ 45639742 (+)
G1743077 NA other downstream 640697 45707142 ~ 45709950 (+)

Expression


Co-expression Network