ndufs2 (ndufs2)


Basic Information

Item Value
gene id ndufs2
gene name ndufs2
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 45432580 ~ 45444197 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021577968.2
CCCAAAGAAGAAGACATTACGTCACCGGGTGCAGAGTAACTTTGACTGCCAAGATGGCGGGGACAATGTTGAGGTCGCTTAGCAAACTTGGACGTCCTTCAACAAAATTGATTATAAATAGTAATTTGGTCAGCCCTGCTTGCACTGTCCTACAAAACAGGCAGAAACAGTGGCAGCCAGATGTGGAGTGGACGGAGCACTATGCTGGGGCGGTGATGTACCCCAGCGCCATCACTGAGAAATGGGTCCCCCCACCATGGAATGATAAGGATGCTCCTATGGAGAAGGAGGTGTCTAACCTGACCATTAACTTTGGGCCCCAGCACCCCGCAGCCCATGGCGTGCTGCGTCTGGTGCTGGAGCTCAGCGGGGAGTCAGTGAAGAAGTGTGATCCCCACGTGGGCCTGCTGCACCGCGGCACAGAAAAACTCATTGAGTACAAGACCTACCTACAGGCGCTGCCTTACTTTGACAGGTTGGACTACGTGTCCATGATGTGTAACGAGCAGGCCTACTCTCTGGCCGTGGAGAAGCTGCTCAACATCCAGGCCCCACCCCGCGCACAGTGGATCAGAGTTCTTTTCGGAGAGCTGACTCGCATCCTGAACCACATCATGGCCATCACCACCCACGCCCTGGACATCGGAGCCATGACCCCCTTCTTCTGGATGttcgaggagagagagaagATGTTTGAGTTCTATgagcgtgtctcaggggccaggatgCATGCAGCCTACGTCAGACCTGGTGGAGTACACCAGGACATGCCACTGGGACTAAtggatgatatctatgagtggTGCAAGAACTTCTCCATCAGAATAGACGAGGTGGAGGAGATGTTGACCAACAACCGTATCTGGAAGAACCGCACCGTGGACATCGGGGTTGTGTCTGCAGAGGACGCACTCAACTATGGCTTCAGTGGTGTGATGCTGAGGGGTTCAGGCATCAAGTGGGACCTGAGGAAGTCTCAGCCCTACGACAAGTATGACGAGGTGGAGTTTGACGTCCCCATCGGCAGCAAGGGAGACTGCTACGACAGGTACCTGTGCAGGGTGGAGGAGATGAGGCAGAGTCTCAGGATCATGATCGAGGCCCTCAACAAGATGCCAGCGGGAGAGATCAAAGTGGACGACGCCAAGGTGGCCCCGCCCAAGAGATCTGAGATGAAGATGTCCATGGAGTCTCTGATCCatcactttaagctgtacacagAGGGTTACCAGGTGCCCCCCGGATCCACATACACAGCTGTAGAAGCACCCAAGGGAGAGTTTGGTGTGTATCTGGTATCTGACGGCTCCAGCAGGCCCTACCGCTGCAAAATCAAAGCTCCAGGATTCGCTCACTTGgcTGCCCTGGATATGATGGCTAAAGGACACATGCTGGCTGACGTAGTGGCCATTATTGGCACCCAGGACATTGTGTTTGGCGAAGTTGACCGTTAAGTTAACACCTGACTGTTGAAAGATGACACCCATGGTTCCACTCTGAAGAGGATTTCTCAGCGCTGTCTTTACTACCTTGTTTGTCTCTCATTCACTGTACTGGGATTTTGACAGATGGGCCAACTCGTAATCATTGACGTATAATGCTGTAAACCTAATAAATATTTTATCTCTGATCGGTCAAA

Function

symbol description
ndufs2 Predicted to enable NADH dehydrogenase (ubiquinone) activity. Predicted to be involved in mitochondrial electron transport, NADH to ubiquinone. Predicted to be part of mitochondrial respiratory chain complex I. Human ortholog(s) of this gene implicated in Leigh disease; hypertrophic cardiomyopathy; inherited metabolic disorder; multiple sclerosis; and nuclear type mitochondrial complex I deficiency 6. Orthologous to human NDUFS2 (NADH:ubiquinone oxidoreductase core subunit S2).

NR:

description
PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0051287 NAD binding molecular_function
GO:0048038 quinone binding molecular_function
GO:0016651 oxidoreductase activity, acting on NAD(P)H molecular_function

KEGG:

id description
K03935 NDUFS2; NADH dehydrogenase (ubiquinone) Fe-S protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021577968.2 True 1639 mRNA 0.53 13 45432580 45444197

Neighbor

gene id symbol gene type direction distance location
kirrel1a LOC106608745 coding upstream 13407 45379310 ~ 45419173 (+)
trnar-ucu-9 NA coding upstream 54498 45378009 ~ 45378082 (+)
il13ra1 i13r2 coding upstream 64368 45359504 ~ 45368212 (+)
dock11 dock11 coding upstream 73288 45247575 ~ 45359292 (+)
LOC118942935 LOC106608740 coding upstream 358144 45073787 ~ 45074436 (+)
fcer1g LOC106608748 coding downstream 164 45444361 ~ 45449712 (+)
nectin4a LOC106608750 coding downstream 11462 45455659 ~ 45474914 (+)
LOC110500870 LOC106608752 coding downstream 41050 45485247 ~ 45517233 (+)
si:dkey-38p12.3 LOC106608755 coding downstream 100319 45544516 ~ 45565742 (+)
si:dkey-19b23.7 LOC106608757 coding downstream 198664 45642861 ~ 45648249 (+)
G1742371 NA non-coding upstream 5633 45422297 ~ 45426947 (+)
G1742308 NA non-coding upstream 168966 45263230 ~ 45263614 (+)
G1742298 NA non-coding upstream 188404 45230536 ~ 45244176 (+)
G1742167 NA non-coding upstream 386935 45042866 ~ 45045645 (+)
G1742379 NA non-coding downstream 36278 45480475 ~ 45521688 (+)
G1742416 NA non-coding downstream 77930 45522127 ~ 45522440 (+)
G1742381 NA non-coding downstream 81180 45525377 ~ 45525723 (+)
G1742383 NA non-coding downstream 82155 45526352 ~ 45526612 (+)
G1742420 NA non-coding downstream 89764 45533961 ~ 45534179 (+)
LOC110500529 LOC106608720 other upstream 960016 44461338 ~ 44480565 (+)
LOC110500528 tmem256 other upstream 981048 44446186 ~ 44451532 (+)
G1740752 NA other upstream 1219350 44212786 ~ 44213230 (+)
G1740453 NA other upstream 1905854 43524736 ~ 43526726 (+)
G1740412 LOC106608825 other upstream 1962255 43469818 ~ 43470325 (+)
G1743043 NA other downstream 195099 45639296 ~ 45639742 (+)
G1743077 NA other downstream 262945 45707142 ~ 45709950 (+)

Expression


Co-expression Network