aco1 (aco1)


Basic Information

Item Value
gene id aco1
gene name aco1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 49611251 ~ 49623432 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021578092.2
CCGACCCGTgccttcaaagcctctcaatggacAATACATAGCGTTAGCAATTCAGGGCTTATATACGTCATCGCGTCCGACAAGCTAGCGAccagaacaaaaaaataaaaaataaacattagcTTCGCTTCAACTGTAAAGAGAAGAAGTGGTAACCCCaggtgtatgtgtgagagagggagaaagtctACAGCTATGAGTAATCCTTTTGCACACATAGTTGAGGCTCTGGACCCAAACATCCCCGACCACAAGTTCTACAACCTCTCAAAGCTTGGAGACCCCAGATATGACCGCCTGCCATTCTCCATCCGTGTGCTGCTTGAGTCGGCTGTGAGGAACTGTGATGGGTTCCTGGTGAAGCGGTCAGACGTGGAGAGCATCCTGAACTGGAAGCAGACCCAGACTCAAAGCGTAGAGGTGCCATTCAGACCTGCCAGGGTCATCCTGCAGGATTTCACTGGAGTGCCTGCAGTAGTGGACTTTGCTGCGATGCGCGACGCTGTGAAGAAGCTGGGTGGAGATCCAGAGAAGATCAACCCAGTATGTCCAGCGGACCTTGTCATTGATCATTCCATCCAGGTGGACTTCAACAGGAAGTCTGACAGCCTCCAGAAAAACCAGGACTTGGAGTTtgacagaaacagagagcgatTTGAGTTCTTAAAGTGGGGCTCCAAAGCATTCCAGAACATGCGTATCATTCCCCCCGGTTCGGGGATAGTGCACCAGGTCAACCTGGAGTACCTGGCCAGGGTGGTGTTTGACCAGGACGGCTACTACTACCCTGACAGTCTGGTGGGCACCGACTCCCACACCACCATGATTGACGGCCTGGGCGTGCTGGGCTGGGGTGTGGGCGGGATCGAGGCGGAGGCCGTCATGCTGGGCCAGCCAATCAGCATGGTGCTCCCCGAAGTCATCGGCTACAGGCTACAGGGCACCCCCAACAAGTTCATCACCTCAACCGACATCGTCCTCACCGTCACTAAGCACCTGCGCCAGGTCGGCGTCGTGGGGAAGTTTGTGGAGTTCTTCGGGCCAGGTGTGGCACAGCTATCCATAGCCGATCGAGCCACCATCGCCAACATGTGCCCAGAGTACGGCGCTACTGCAGCTTTTTTCCCTGTAGACCACATCAGTCTTCAGTACCTGGAGCAGACAGggagagatgctgagaagCTGGATTACATCACCAGGTATCTGAAAGCAGTAGCCATGTTCAGAGACTACAGCAACTCCTCCCAGGACCCTGACTTCACCCAGGTGCATGAGCTGGACCTGAGCACCGTGGTTCCGTGCTGCAGTGGTCCCAAGAGGCCTCAGGACAGGGTGGCTGTGTCGGACATGAAGACTGACTTTGAGGCATGCCTGGCAGCTAAGCAAGGCTTCAAGGGTTTCCAGGTGACTCCGGAGCTTCACCACGTGAAGGTTCCATTCCAATACAATGACAAGGAGTACAGCCTCTCCCACGGCTCAGTGGTCATTGCTGCCATCACCAGCTGTACCAACACCAGCAACCCCTCTGTTATGCTGGGGGCTGGTCTCCTGGCGAAGAAGGCCATCGAGGCTGGTCTGAGCATGAAGCCCTACATCAAGACCAGCCTGTCGCCCGGCAGCGGAGTGGTCACCTACTACCTAAAGGAGAGTGGCGTCATGGACTACCTCTTCCAGCTCGGGTTTGAAGTGGTGGGTTATGGCTGCATGACATGTATAGGTAACAGTGGGCCCCTCCCAGAGCCTGTGGTGGAGGCCATTACTCAGGGAGATCTAGTAGCCGCTGGGATCCTATCAGGTAACAGGAACTTTGAGGGGCGTGTCCACCCCAACACACGAGCCAATTACCTAGCCTCTCCCCCGCTGGTCATTGCCTACGCTATCGCCGGAACCGTGAGGATTGACTTTGATACAGAGCCCATTGCTCTGAACAACAAAGGGAAGGAGGTTTTCCTCAGGGACATCTGGCCCACACGGGAGGAGATCCAGGCTGTGGAGAGACAGTTTGTCATTCCTGCTATGTTCAAAGAGGTTTATGAGAAGATTGAGAAAGTGAATGAACGCTGGAACGCCCTCAACGCCCCCTCAGACAAGCTGTACACCTGGGACCCCAAGTCCACCTACATCAAGTCCCCACCCTTCTTCGATGGACTGACCAAGGAACTACAGACCCCCAAGTCCATAACTAACGCCTACGTGCTGCTGAACTTCGGTGACTCTGTGACCACAGACCACATCTCTCCTGCTGGGAACATCGCCCGAACCAGTCCTGCAGCACGGTACCTGACCAGCAGAGGTTTAAACCCACGTGACTTCAACTCGTACGGATCACGGCGTGGTAACGATGCTGTGATGGCCCGGGGCACGTTCGCCAACATCCGTCTCTTCAACAAGTTCCTGAACAAGCAGGCTCCGCGCACCCTGCACTTACCTTCTGATGAAACGCTGGATGTGTTTGATGCTGCTGAGCGCTACCAGCAGGCTGGCCTCCCCCTCATGATCCTGGCTGGGAAGGAGTATGGATCGGGCAGCTCGAGAGACTGGGCCGCTAAAGGTCCCTtcctcctgGGAATCAAGGCGGTGCTGGCAGAGAGCTATGAGCGAATCCACCGCAGTAACCTGGTGGGCATGGGGGTGATTCCTCTGGAGTACCTGGCTGGGGACACAGCAGACAGCCTGGGGCTGACAGGACGTGAGCGCTACACCGTGGTCATCCCTGAGCCACTCACACCCAGGATGATTGTTGACATTAAGCTCGACACGGGCAAAACATTCCAGGTGAGGATGAGGTTTGACACGGACGTGGAGCTGACGTACTTCCACAACGGAGGCATCCTGAACTACATGATCCGCAAGATGTCTGAGAACTAGAGAGCACGCCGTTGGGACCAAGTCACGCTGAACACGAAAATCTTCTGTGTAGATGGCGATACAGAACGTGTTgagtctccctctctgtttctgttcgaTTTTAACATTTGGTTTACATAATCTTATGTGTTTTTAGTGCATTAATTGGTTCCATACTTGATCCGTTGCAGGTCGGAATGATGGAATGAGTCAAAGTACCCCACAACACATTTAACACTGGTATGATgtacacctgggttcaaatagtctTTGCTTTTTTAATCAAGCCCAGCTAAAGTGtttgaaaacaaatattttaacACAGGTCTCGTATGATGTAACCACCCTACCTCTTTGTTGCCAAACCAGTGGTTCACCCACCCTCATCCCTCCCACCGTccatgctaacattagctagccatGCACACAAACCTAGTCGGCTGTCATGTCCAGTTGTTACCATCGTTGGTTCAAAGCTGCCAGTCATGGTCATCTGTTCCGACCAGGGTTGTATTTGTTGATTTCATGTCTTATTATAAACTGCTGCTGTGGTGAAGCAGACATAGGCTGCTTCtgaaatggagccctattcccttcatagttcaCTACTTGTGACCAAAAtgtgtgcactgtatagggaataaggtgttaaACCCAGACACTGTAATAGGTTGGCTTCGACTCCTGACAACGAGGGTGTTGTCTTTGTATTATGAAAAAGAGACCAGCATAGTTTATTAGAATGCAATTAGAGTACCTAAGTTGAATTGCCTTAAATGGTGAAGTTGACATTAACCCTCGCCTTTTATGAGAGGAACAGTATATTGTGCGTATGCCTCGTCTCTTAAATCCAGCCTCTGTTTTTACTAGATCACAAATTTcagtcttgtttgtttcacaaatcCACTTTTCTTTCTTAACCTGTTGATGTTGGCAATAGGACTTATGATTTTGTCACAGTGGGTGGTTGCAACATTTTAGTACGTTTCCAGAAATCTCTGTTAGAATCCACCAACCAGAATTGTGCAACCCTATTGGTGAGTGTGGCTGGACTTAATTCCCAGTTGCCGGTGTGACAGGGAGGCTAGTAAATCAAATTAATATAATCATGAATTCCAAACTGCATGAAGTTTCTTAGCTGAAGCGAGAATTCATATTTTCTCTAAGCACTTGGGGTTTAATGGACCAAATAGTTTCTATCAATAAGAATGAAGTCCTACTTTGAGATTCTTTTCAGAAGGTACTTGTTTGTGGTATggataaaatgtatatttttcccCCCAAGGTTAGCAGAAGGAGTCTGCTACAAGGCCACACCGGGGCTAGTGGTAGTCTTCGTCCTTCCTGTTTTTCTTTCCGCAAATAACTGGACATATCCACCATATTGCAGAGTAAGACTACATTTGTCAAATTTAATACACATTCATTTGACTTTAGACAGGAATGTTTTCGAAAAAAAGGAGAGCTGCACATTAGAACCTCAGATGCAAGAAGTGAATAAccacgtttcgacagacaagctgtcttcatcaaagTATattctccgctagccagcacctcgcctaaacaggtgtgcgGTTCTTTTGCCTCTAATAAACTTTAACTTCTACATAA
>XM_021578093.2
ACTGTCTGTTCAACCTTGGCAGAGAATCTTCATTTTTAGGCAATAGGCTTATGCTAATACTTCTAGCCTATTCCTGTCAAGCACGATTTGTAGGCTATTTGGTTGCATTTTCCTGAGTATAAAAAGGATGTTAGATAGGGATTGGTAGTGAATTAGTTCAAACCACAGTTTGAACAATGCTCAAGTTTTTTCCACTTGTTGAGTGATTAGCCTAATTTAATACGCAGCAGAGGATAGTAGTATTCCAGAAATATTGTGTTTTGGAACACCGTACTAGGCTAATTCACAGGTCTGTTATACCCAGCATTTAGCTGGAATCGTACTTCCCTGTCTGTCCGTGCTGAAACTTCCTTGACCTAACAGGTTCTCCCGTAAAAAGATAAAAAGCAGTAACCCCaggtgtatgtgtgagagagggagaaagtctACAGCTATGAGTAATCCTTTTGCACACATAGTTGAGGCTCTGGACCCAAACATCCCCGACCACAAGTTCTACAACCTCTCAAAGCTTGGAGACCCCAGATATGACCGCCTGCCATTCTCCATCCGTGTGCTGCTTGAGTCGGCTGTGAGGAACTGTGATGGGTTCCTGGTGAAGCGGTCAGACGTGGAGAGCATCCTGAACTGGAAGCAGACCCAGACTCAAAGCGTAGAGGTGCCATTCAGACCTGCCAGGGTCATCCTGCAGGATTTCACTGGAGTGCCTGCAGTAGTGGACTTTGCTGCGATGCGCGACGCTGTGAAGAAGCTGGGTGGAGATCCAGAGAAGATCAACCCAGTATGTCCAGCGGACCTTGTCATTGATCATTCCATCCAGGTGGACTTCAACAGGAAGTCTGACAGCCTCCAGAAAAACCAGGACTTGGAGTTtgacagaaacagagagcgatTTGAGTTCTTAAAGTGGGGCTCCAAAGCATTCCAGAACATGCGTATCATTCCCCCCGGTTCGGGGATAGTGCACCAGGTCAACCTGGAGTACCTGGCCAGGGTGGTGTTTGACCAGGACGGCTACTACTACCCTGACAGTCTGGTGGGCACCGACTCCCACACCACCATGATTGACGGCCTGGGCGTGCTGGGCTGGGGTGTGGGCGGGATCGAGGCGGAGGCCGTCATGCTGGGCCAGCCAATCAGCATGGTGCTCCCCGAAGTCATCGGCTACAGGCTACAGGGCACCCCCAACAAGTTCATCACCTCAACCGACATCGTCCTCACCGTCACTAAGCACCTGCGCCAGGTCGGCGTCGTGGGGAAGTTTGTGGAGTTCTTCGGGCCAGGTGTGGCACAGCTATCCATAGCCGATCGAGCCACCATCGCCAACATGTGCCCAGAGTACGGCGCTACTGCAGCTTTTTTCCCTGTAGACCACATCAGTCTTCAGTACCTGGAGCAGACAGggagagatgctgagaagCTGGATTACATCACCAGGTATCTGAAAGCAGTAGCCATGTTCAGAGACTACAGCAACTCCTCCCAGGACCCTGACTTCACCCAGGTGCATGAGCTGGACCTGAGCACCGTGGTTCCGTGCTGCAGTGGTCCCAAGAGGCCTCAGGACAGGGTGGCTGTGTCGGACATGAAGACTGACTTTGAGGCATGCCTGGCAGCTAAGCAAGGCTTCAAGGGTTTCCAGGTGACTCCGGAGCTTCACCACGTGAAGGTTCCATTCCAATACAATGACAAGGAGTACAGCCTCTCCCACGGCTCAGTGGTCATTGCTGCCATCACCAGCTGTACCAACACCAGCAACCCCTCTGTTATGCTGGGGGCTGGTCTCCTGGCGAAGAAGGCCATCGAGGCTGGTCTGAGCATGAAGCCCTACATCAAGACCAGCCTGTCGCCCGGCAGCGGAGTGGTCACCTACTACCTAAAGGAGAGTGGCGTCATGGACTACCTCTTCCAGCTCGGGTTTGAAGTGGTGGGTTATGGCTGCATGACATGTATAGGTAACAGTGGGCCCCTCCCAGAGCCTGTGGTGGAGGCCATTACTCAGGGAGATCTAGTAGCCGCTGGGATCCTATCAGGTAACAGGAACTTTGAGGGGCGTGTCCACCCCAACACACGAGCCAATTACCTAGCCTCTCCCCCGCTGGTCATTGCCTACGCTATCGCCGGAACCGTGAGGATTGACTTTGATACAGAGCCCATTGCTCTGAACAACAAAGGGAAGGAGGTTTTCCTCAGGGACATCTGGCCCACACGGGAGGAGATCCAGGCTGTGGAGAGACAGTTTGTCATTCCTGCTATGTTCAAAGAGGTTTATGAGAAGATTGAGAAAGTGAATGAACGCTGGAACGCCCTCAACGCCCCCTCAGACAAGCTGTACACCTGGGACCCCAAGTCCACCTACATCAAGTCCCCACCCTTCTTCGATGGACTGACCAAGGAACTACAGACCCCCAAGTCCATAACTAACGCCTACGTGCTGCTGAACTTCGGTGACTCTGTGACCACAGACCACATCTCTCCTGCTGGGAACATCGCCCGAACCAGTCCTGCAGCACGGTACCTGACCAGCAGAGGTTTAAACCCACGTGACTTCAACTCGTACGGATCACGGCGTGGTAACGATGCTGTGATGGCCCGGGGCACGTTCGCCAACATCCGTCTCTTCAACAAGTTCCTGAACAAGCAGGCTCCGCGCACCCTGCACTTACCTTCTGATGAAACGCTGGATGTGTTTGATGCTGCTGAGCGCTACCAGCAGGCTGGCCTCCCCCTCATGATCCTGGCTGGGAAGGAGTATGGATCGGGCAGCTCGAGAGACTGGGCCGCTAAAGGTCCCTtcctcctgGGAATCAAGGCGGTGCTGGCAGAGAGCTATGAGCGAATCCACCGCAGTAACCTGGTGGGCATGGGGGTGATTCCTCTGGAGTACCTGGCTGGGGACACAGCAGACAGCCTGGGGCTGACAGGACGTGAGCGCTACACCGTGGTCATCCCTGAGCCACTCACACCCAGGATGATTGTTGACATTAAGCTCGACACGGGCAAAACATTCCAGGTGAGGATGAGGTTTGACACGGACGTGGAGCTGACGTACTTCCACAACGGAGGCATCCTGAACTACATGATCCGCAAGATGTCTGAGAACTAGAGAGCACGCCGTTGGGACCAAGTCACGCTGAACACGAAAATCTTCTGTGTAGATGGCGATACAGAACGTGTTgagtctccctctctgtttctgttcgaTTTTAACATTTGGTTTACATAATCTTATGTGTTTTTAGTGCATTAATTGGTTCCATACTTGATCCGTTGCAGGTCGGAATGATGGAATGAGTCAAAGTACCCCACAACACATTTAACACTGGTATGATgtacacctgggttcaaatagtctTTGCTTTTTTAATCAAGCCCAGCTAAAGTGtttgaaaacaaatattttaacACAGGTCTCGTATGATGTAACCACCCTACCTCTTTGTTGCCAAACCAGTGGTTCACCCACCCTCATCCCTCCCACCGTccatgctaacattagctagccatGCACACAAACCTAGTCGGCTGTCATGTCCAGTTGTTACCATCGTTGGTTCAAAGCTGCCAGTCATGGTCATCTGTTCCGACCAGGGTTGTATTTGTTGATTTCATGTCTTATTATAAACTGCTGCTGTGGTGAAGCAGACATAGGCTGCTTCtgaaatggagccctattcccttcatagttcaCTACTTGTGACCAAAAtgtgtgcactgtatagggaataaggtgttaaACCCAGACACTGTAATAGGTTGGCTTCGACTCCTGACAACGAGGGTGTTGTCTTTGTATTATGAAAAAGAGACCAGCATAGTTTATTAGAATGCAATTAGAGTACCTAAGTTGAATTGCCTTAAATGGTGAAGTTGACATTAACCCTCGCCTTTTATGAGAGGAACAGTATATTGTGCGTATGCCTCGTCTCTTAAATCCAGCCTCTGTTTTTACTAGATCACAAATTTcagtcttgtttgtttcacaaatcCACTTTTCTTTCTTAACCTGTTGATGTTGGCAATAGGACTTATGATTTTGTCACAGTGGGTGGTTGCAACATTTTAGTACGTTTCCAGAAATCTCTGTTAGAATCCACCAACCAGAATTGTGCAACCCTATTGGTGAGTGTGGCTGGACTTAATTCCCAGTTGCCGGTGTGACAGGGAGGCTAGTAAATCAAATTAATATAATCATGAATTCCAAACTGCATGAAGTTTCTTAGCTGAAGCGAGAATTCATATTTTCTCTAAGCACTTGGGGTTTAATGGACCAAATAGTTTCTATCAATAAGAATGAAGTCCTACTTTGAGATTCTTTTCAGAAGGTACTTGTTTGTGGTATggataaaatgtatatttttcccCCCAAGGTTAGCAGAAGGAGTCTGCTACAAGGCCACACCGGGGCTAGTGGTAGTCTTCGTCCTTCCTGTTTTTCTTTCCGCAAATAACTGGACATATCCACCATATTGCAGAGTAAGACTACATTTGTCAAATTTAATACACATTCATTTGACTTTAGACAGGAATGTTTTCGAAAAAAAGGAGAGCTGCACATTAGAACCTCAGATGCAAGAAGTGAATAAccacgtttcgacagacaagctgtcttcatcaaagTATattctccgctagccagcacctcgcctaaacaggtgtgcgGTTCTTTTGCCTCTAATAAACTTTAACTTCTACATAA

Function

symbol description
aco1 Predicted to enable aconitate hydratase activity; iron-responsive element binding activity; and iron-sulfur cluster binding activity. Predicted to be involved in citrate metabolic process and tricarboxylic acid cycle. Predicted to act upstream of or within cellular iron ion homeostasis and response to iron(II) ion. Predicted to be located in cytoplasm. Predicted to be active in cytosol and mitochondrion. Is expressed in blood and presumptive blood. Orthologous to human ACO1 (aconitase 1).

NR:

description
cytoplasmic aconitate hydratase

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0051539 4 iron, 4 sulfur cluster binding molecular_function

KEGG:

id description
K01681 ACO, acnA; aconitate hydratase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021578092.2 False 4461 mRNA 0.50 21 49611251 49623432
XM_021578093.2 True 4699 mRNA 0.49 21 49612440 49623432

Neighbor

gene id symbol gene type direction distance location
LOC110500625 cj011 coding upstream 1537 49606099 ~ 49609714 (+)
LOC110500624 LOC106608622 coding upstream 5374 49593386 ~ 49605877 (+)
LOC110500610 LOC106608613 coding upstream 1197117 48382854 ~ 48414134 (+)
LOC110500605 LOC106608606 coding upstream 1653234 47368664 ~ 47958017 (+)
LOC110500876 LOC106577625 coding upstream 2498189 47034102 ~ 47113062 (+)
LOC110500627 LOC106608625 coding downstream 31260 49654692 ~ 49662658 (+)
LOC110500628 LOC106608626 coding downstream 57236 49680668 ~ 49772757 (+)
LOC110500629 LOC106608629 coding downstream 267155 49890587 ~ 50027397 (+)
LOC110500631 NA coding downstream 412122 50035554 ~ 50043842 (+)
LOC110500632 ddit4l coding downstream 430456 50053888 ~ 50056399 (+)
G1747830 NA non-coding upstream 26079 49459688 ~ 49585172 (+)
G1747833 LOC106608620 non-coding upstream 26489 49458248 ~ 49584762 (+)
G1747832 NA non-coding upstream 29863 49563533 ~ 49581388 (+)
G1747842 NA non-coding upstream 125328 49478939 ~ 49485923 (+)
G1747831 NA non-coding upstream 154101 49456453 ~ 49457150 (+)
G1747905 NA non-coding downstream 41372 49664804 ~ 49665123 (+)
G1747966 NA non-coding downstream 45315 49668747 ~ 49668956 (+)
G1747975 NA non-coding downstream 51803 49675235 ~ 49675508 (+)
G1747977 NA non-coding downstream 52619 49676051 ~ 49676367 (+)
G1748021 NA non-coding downstream 135658 49759090 ~ 49759342 (+)
G1747814 LOC106606817 other upstream 164625 49445839 ~ 49446626 (+)
G1747255 NA other upstream 633493 48977326 ~ 48977758 (+)
G1746471 LOC106608612 other upstream 1247325 48325100 ~ 48363926 (+)
G1746210 NA other upstream 1516132 48094767 ~ 48095119 (+)
LOC110500883 LOC106577571 other downstream 975478 50598799 ~ 50615280 (+)
LOC110500674 dulda other downstream 1493013 51116362 ~ 51133346 (+)
gbrap gbrap other downstream 1510657 51134089 ~ 51142008 (+)
G1749651 NA other downstream 1739254 51362686 ~ 51363380 (+)
G1749650 NA other downstream 1795537 51418969 ~ 51450475 (+)

Expression


Co-expression Network