LOC110500662 (LOC106608658)


Basic Information

Item Value
gene id LOC110500662
gene name LOC106608658
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 50734723 ~ 50767433 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_002470143.2
TATTTTGAAAATGACCTCTCATTCGGGCACCGGACAGCGACACCGCAGCTGTTTGGTTTGGAACCATGACTGAAGATGACGGATTCAGTGGTCGTGGAGGGATATGTCAAATTCAGAGATGGAAAAAAGTGGAAGGATAGGTGGGTCGCACTCCGCAAGCCATCGCCCGTAGCAGACTGCTTGGTACTTCTGGTCTACAAAGACAAGTCGGATAAAGCCCAGGGCCACCGGGAGAGGGTCAGTGTCACCTTGGAGGACATCTGTGGTCTGGAGATAGGTCTCTCCTATGAGGGGGTGGGCTACACGCTGGTCATCATCTGCCTGGGCCAGGTTGTCATGCTGGGCTTCGACGGAAAGGAGGCTCTGCTGGCCTGGGACATCCGCATCCGCTACAGTCTGGGGGAAGTCCACAGGTTTAGCGTTGGTATCTTACCAGGCACCATGTTGGAGAGCGGGCCTGCGACCCTTCACTTGTGTAACaacctattggtcctggtcagggACATTTTCCCCGTTATCATCGGCCAGTGGAACCTTCCAGACCTGCGCAGATATGGGCCTGTACCAAACGGCTTCGTCTTTGAGGGGGGGACGCGATGCGGCTACTGGGCTGGCGTCTTCTTCCTATCATCCATGGAGGGGGAGCAGATCAGCTTTCTGTTCGACTGCATCGTCAGAGGCATCTCCCCCAGCAGAGGCCCTTTTGGACTTCGGCCAGTCCTGCCAGATACCAACGCTGTCGCTAACCAGGCCTACTCTGAAAAGAGGGTGAACCATGAGGCCCAGGAGTTGGAGAAACGACTCAACATGCTGTCTCACCAGAGCAGTACAGCTTCCTCCACATATGGTCTGTCTGTGGCGGGAGACGTCTGCAGCATATCAGGCTCCTCTCACACCTCCGACACCAGCCAATCAGACTCCATCGTCGGCAGCCGGCTGGCCATTTGGACTGAGCCTGTCACAACAAGCTCTACCCGCACAGAGACCATCATTGGCCAGTTACAGGCCAGGGAGAAACCATCCACCAGCCAGGTGGGTGGAGCCCGTGTAGTAGCCAAGACCCCTCGGTCCCGGCAGCTGCAGGAGATTGGTCGCCAGAGCTCGTCCGACAGCGGCATCGCCACAGGAAGCCACTCCTCGTACTCTGGCAGTTTCTCCTCCTACGTGGATAGCCTGGACTTTGGCTCCCTGCTTAGCCTGCCCCCTCACCTGTCTCTAGACCTGGCCCCCTGTACCTGTCCCCATGCACCAGGACATGAGTACCAGGTACCCACCTCACTGAGGTACATCTATGACACCCCCCGAACTCTACTGCAGGGGGTAACAGGAGGGGCCAGGGGGCAGGATATCTCCACAACACCTATGGACCAGGTGGCCAGTTCACCCCCATTATGTGAGTCATCACAGGGGGGGAAAGATGCTCCTCTTGGGGGTCTCTCGGACAATGTTGCCAGGCGCTCCACCACAGAGCTCCTGCAGAGCCACTCTGAGGAGAGCAAAAGATGGGTGGCGCCCCCTAGTGACAGTCAACACCCAGAGtcctgtcaggtctgcagtagtTCCCAACCCACTGCCTCCAAAACCCTCCTCACTATCTGCCCCACCTGTGGAGGATTCAAGGGGAACCCGCTCTCCTACACAGTGGGCTCGGCAATGCCAGCCATACCAGGTAAAtctgttccactggctgtgtgcgtgtgtatgcacACCGATGCTATTATATGCCTTTAATATCCCTGTCCAAGCATGAATTTATTTTCAGACTTGTTTATTTTGCAGCATGTTTAGATAAGTAGTTTGTTCTTATTAATGAATCCCATGAATTATTAAACCGATGTGCAGAACCTGTATAACTAGATATGCGTTGAGCTGCAAGCACAGAACTTTTGGACTGAGGTTATCGAGACCACGCCCTCACCTGCCTCAGTGACCAATCGCAGCTCTGAGAAGCTGAAGAGTATGAATGAGGAACCAGCAGCTCTCAGCTGAGCTATTAGGCTCCCGCGGCACAACCGGAGAACCATGTaaaaagacaaacacacagaaactgTATGAGTCAACGGCCTCTGCTTTGGGACGTGAGCTTACATCCCAAGAAACCTTACCACCTGCAGACCTTTGTGTGATCTGAACTCGGCTTGACAAGGCCACAAGGGGGGAGACAAGGGGACTATCATTTTACGAAAACTGCTTCAAGTGCAAGAACGGGGAGGAGTGCTATTCGCCCACTAGGGTGACACCAGCATTGCCCGGGAACAGCGTTGTCCTATAGGTTGGTCAGATTCACCACAGTGGTGTATGTTTTGGACAGCCACTACCCTCTGGGCCTTGCTTGGAGAACGGTGTGGACTGTAAAGGAACACCTAAAGAAGAGAAGCCCATTGAAGTGCAACTGCTGTACCCTAAATTACAAGATGGAGGCCTTCCATGTGTGGAGGTGAAAGGTCATTCAGTTCCGTTGAAGACAAGAAGCTGAAAAGTATGGAGGAGAGGAGCAAAGTTGAGTATGATACCATGGATAGCTGGGCGTTGGAGAAGAGTTCAGAGCCAGAGGAGAAAAGCAAGTATGAGCTGGTGGGCAGTTGTGGACAACAGCGGT
>XM_021578150.2
ATTTTGAAAATGACCTCTCATTCGGGCACCGGACAGCGACACCGCAGCTGTTTGGTTTGGAACCATGACTGAAGATGACGGATTCAGTGGTCGTGGAGGGATATGTCAAATTCAGAGATGGAAAAAAGTGGAAGGATAGGTGGGTCGCACTCCGCAAGCCATCGCCCGTAGCAGACTGCTTGGTACTTCTGGTCTACAAAGACAAGTCGGATAAAGCCCAGGGCCACCGGGAGAGGGTCAGTGTCACCTTGGAGGACATCTGTGGTCTGGAGATAGGTCTCTCCTATGAGGGGGTGGGCTACACGCTGGTCATCATCTGCCTGGGCCAGGTTGTCATGCTGGGCTTCGACGGAAAGGAGGCTCTGCTGGCCTGGGACATCCGCATCCGCTACAGTCTGGGGGAAGTCCACAGGTTTAGCGTTGGTATCTTACCAGGCACCATGTTGGAGAGCGGGCCTGCGACCCTTCACTTGTGTAACaacctattggtcctggtcagggACATTTTCCCCGTTATCATCGGCCAGTGGAACCTTCCAGACCTGCGCAGATATGGGCCTGTACCAAACGGCTTCGTCTTTGAGGGGGGGACGCGATGCGGCTACTGGGCTGGCGTCTTCTTCCTATCATCCATGGAGGGGGAGCAGATCAGCTTTCTGTTCGACTGCATCGTCAGAGGCATCTCCCCCAGCAGAGGCCCTTTTGGACTTCGGCCAGTCCTGCCAGATACCAACGCTGTCGCTAACCAGGCCTACTCTGAAAAGAGGGTGAACCATGAGGCCCAGGAGTTGGAGAAACGACTCAACATGCTGTCTCACCAGAGCAGTACAGCTTCCTCCACATATGGTCTGTCTGTGGCGGGAGACGTCTGCAGCATATCAGGCTCCTCTCACACCTCCGACACCAGCCAATCAGACTCCATCGTCGGCAGCCGGCTGGCCATTTGGACTGAGCCTGTCACAACAAGCTCTACCCGCACAGAGACCATCATTGGCCAGTTACAGGCCAGGGAGAAACCATCCACCAGCCAGGTGGGTGGAGCCCGTGTAGTAGCCAAGACCCCTCGGTCCCGGCAGCTGCAGGAGATTGGTCGCCAGAGCTCGTCCGACAGCGGCATCGCCACAGGAAGCCACTCCTCGTACTCTGGCAGTTTCTCCTCCTACGTGGATAGCCTGGACTTTGGCTCCCTGCTTAGCCTGCCCCCTCACCTGTCTCTAGACCTGGCCCCCTGTACCTGTCCCCATGCACCAGGACATGAGTACCAGGTACCCACCTCACTGAGGTACATCTATGACACCCCCCGAACTCTACTGCAGGGGGTAACAGGAGGGGCCAGGGGGCAGGATATCTCCACAACACCTATGGACCAGGTGGCCAGTTCACCCCCATTATGTGAGTCATCACAGGGGGGGAAAGATGCTCCTCTTGGGGGTCTCTCGGACAATGTTGCCAGGCGCTCCACCACAGAGCTCCTGCAGAGCCACTCTGAGGAGAGCAAAAGATGGGTGGCGCCCCCTAGTGACAGTCAACACCCAGAGtcctgtcaggtctgcagtagtTCCCAACCCACTGCCTCCAAAACCCTCCTCACTATCTGCCCCACCTGTGGAGGATTCAAGGGGAACCCGCTCTCCTACACAGTGGGCTCGGCAATGCCAGCCATACCAGACAAGAAGCTGAAAAGTATGGAGGAGAGGAGCAAAGTTGAGTATGATACCATGGATAGCTGGGCGTTGGAGAAGAGTTCAGAGCCAGAGGAGAAAAGCAAGTATGAGCTGGTGGGCAGTTGTGGACAACAGCGGTTCCTTCATGAGACTGAAGGGGCCAAGTCTGTGTTTCCGCCAGACATGGTGGCTCCAGAAAGACCCTGCAGTGATGGTGTGACATACGTCAATATTCCCATCAGCCCCATGTCTAAGAAACAGCTGAACTACATGGAGCTGGAGCATCAGGAGCATGCTGGGGTCAGGGGGACTGGCCAACACCTTCCAGGACAGATTGGAGATTGCTCCCGATCTTTCCGAGTGACAACTGAGCCACCATCATCAGCGTGGTCTAATCGGCAGAAAAGTCAACCATTAACGTCATTACTCTCCGGGAATATGAGGGACAGTCTTGCTCAACGCGAGAAAGGTTCATTTCCAATGTCAGCGAGAGGATTTCCGTCCCGGTGTGTGCCATCATCTATATATCACTTGGAGGAGCAGCGTTCCAGTTTAGCCGCGTCAGAAGGTCATAGGGCGTTCGGAATACCATGGGAAAAGTTCCTCTAAATATGCCCTGATCGACATCACTGCTACGGATGCCGCCCACAAAACGGGTACCCAGCATGCcttggggagagaggagggtcttCACACCCTGGAGCAGAGGAGGAGGGTAGTACCACAGTGACATCCCAACTTCAATCTTGACCTC
>XM_021578151.2
TTTGAAAATGACCTCTCATTCGGGCACCGGACAGCGACACCGCAGCTGTTTGGTTTGGAACCATGACTGAAGATGACGGATTCAGTGGTCGTGGAGGGATATGTCAAATTCAGAGATGGAAAAAAGTGGAAGGATAGGTGGGTCGCACTCCGCAAGCCATCGCCCGTAGCAGACTGCTTGGTACTTCTGGTCTACAAAGACAAGTCGGATAAAGCCCAGGGCCACCGGGAGAGGGTCAGTGTCACCTTGGAGGACATCTGTGGTCTGGAGATAGGTCTCTCCTATGAGGGGGTGGGCTACACGCTGGTCATCATCTGCCTGGGCCAGGTTGTCATGCTGGGCTTCGACGGAAAGGAGGCTCTGCTGGCCTGGGACATCCGCATCCGCTACAGTCTGGGGGAAGTCCACAGGTTTAGCGTTGGTATCTTACCAGGCACCATGTTGGAGAGCGGGCCTGCGACCCTTCACTTGTGTAACaacctattggtcctggtcagggACATTTTCCCCGTTATCATCGGCCAGTGGAACCTTCCAGACCTGCGCAGATATGGGCCTGTACCAAACGGCTTCGTCTTTGAGGGGGGGACGCGATGCGGCTACTGGGCTGGCGTCTTCTTCCTATCATCCATGGAGGGGGAGCAGATCAGCTTTCTGTTCGACTGCATCGTCAGAGGCATCTCCCCCAGCAGAGGCCCTTTTGGACTTCGGCCAGTCCTGCCAGATACCAACGCTGTCGCTAACCAGGCCTACTCTGAAAAGAGGGTGAACCATGAGGCCCAGGAGTTGGAGAAACGACTCAACATGCTGTCTCACCAGAGCAGTACAGCTTCCTCCACATATGGTCTGTCTGTGGCGGGAGACGTCTGCAGCATATCAGGCTCCTCTCACACCTCCGACACCAGCCAATCAGACTCCATCGTCGGCAGCCGGCTGGCCATTTGGACTGAGCCTGTCACAACAAGCTCTACCCGCACAGAGACCATCATTGGCCAGTTACAGGCCAGGGAGAAACCATCCACCAGCCAGGTGGGTGGAGCCCGTGTAGTAGCCAAGACCCCTCGGTCCCGGCAGCTGCAGGAGATTGGTCGCCAGAGCTCGTCCGACAGCGGCATCGCCACAGGAAGCCACTCCTCGTACTCTGGCAGTTTCTCCTCCTACGTGGATAGCCTGGACTTTGGCTCCCTGCTTAGCCTGCCCCCTCACCTGTCTCTAGACCTGGCCCCCTGTACCTGTCCCCATGCACCAGGACATGAGTACCAGGTACCCACCTCACTGAGGTACATCTATGACACCCCCCGAACTCTACTGCAGGGGGTAACAGGAGGGGCCAGGGGGCAGGATATCTCCACAACACCTATGGACCAGGTGGCCAGTTCACCCCCATTATGTGAGTCATCACAGGGGGGGAAAGATGCTCCTCTTGGGGGTCTCTCGGACAATGTTGCCAGGCGCTCCACCACAGAGCTCCTGCAGAGCCACTCTGAGGAGAGCAAAAGATGGGTGGCGCCCCCTAGTGACAGTCAACACCCAGAGtcctgtcaggtctgcagtagtTCCCAACCCACTGCCTCCAAAACCCTCCTCACTATCTGCCCCACCTGTGGAGGATTCAAGGGGAACCCGCTCTCCTACACAGTGGGCTCGGCAATGCCAGCCATACCAGACAAGAAGCTGAAAAGTATGGAGGAGAGGAGCAAAGTTGAGTATGATACCATGGATAGCTGGGCGTTGGAGAAGAGTTCAGAGCCAGAGGAGAAAAGCAAGTATGAGCTGGTGGGCAGTTGTGGACAACAGCGGTTCCTTCATGAGACTGAAGGGGCCAAGTCTGTGTTTCCGCCAGACATGGTGGCTCCAGAAAGACCCTGCAGTGATGGTGTGACATACGTCAATATTCCCATCAGCCCCATGTCTAAGAAACAGCTGAACTACATGGAGCTGGAGCATCAGGAGCATGCTGGGGTCAGGGGGACTGGCCAACACCTTCCAGGACAGAGGAAAAGTTCCTCTAAATATGCCCTGATCGACATCACTGCTACGGATGCCGCCCACAAAACGGGTACCCAGCATGCcttggggagagaggagggtcttCACACCCTGGAGCAGAGGAGGAGGGTAGTACCACAGTGACATCCCAACTTCAATCTTGACCTCCACAGGGCATATGACTGGCCTAGACTAGGCTGTTGTATAGAATTCACCAGAAACATGGATTTCCTGGGACGCCTCAAGTTGCCGTGATGTCAAACTCCTCTGAGATCTGCCAGATTTGATATCTTTAACACCGATTGTTGACAGCTTCCATTGAATTTTGTCCCAATTACTGGGCTCTTCTGGGGAAGACTAACCCCAAGAATCACGCCTTCTGCCCTCAGTGTGAATTATACCAACAGTAGGCCTACAGCACTGACGCTTCACAATCATCACGAAAGCAACATGAAATCAAACTCTAAGGAAAAAATCTAAAGTTGCTGCTTGGATGGAAGGGAACATTTCAATCAAGGCTCTCTTTAGCCGTGTTCACATTGGCAGTTTAAAGTGACTCAAATCCTTTTTATTTGCATTTCTGATTTGCATCTGCTCTTTTTCCTGCAGACTGACCAGTCCAAAAGCACATGTAATCGGACATTTCAACCTACATTTCAAACCACATTCTTAGGTGGTTTGAAGagatacaaatctgattcctggccatgtaAATTGTGGCTAAACGGTCAAATCTGAATTATTTGCCCTCAAGGGGTTTTTAGACAGTTATTCggcatatcttgttgcttgctagctGCTCTGTTGGCAGTTTGACGTGAACACGCGGTAGCTTACTAGTTTGTTAATTGTTTACCAACAAATGAGTGAATGTGCTAGAAAactaaacagctacctagctaactagcCAAAATAGACTGGATCATTTTTAAAGTGTTCTTACgctatgattttgaacattcaaagcaactgggaaatgtccatggcaggcattgttgCCACCTTATCTTGCTACCTAACTTCTGAGGGATAGGATGCAcaagcaccaccaccaatcagcctacaaCACCGCACACACATCCGTCACTACTACTAGCATAGCTTTGTCAGCAAATGGTGTCAGAACACACTAATCCGATTTTgtcacttgtaacttgctgtttggacatTCAGTAGTCCAGAACGGATTTGAAACTGATTTGAGCAATAaggcagtgtgaacaaggcttttgTATATTCAGAAATCTCATTAGAAGGCATTATGTCACTGTCACAGCCTGGGCAGACTTGGGTGGAGTGGGGGGCTGAAAGTGCCAGTCTTAGGGGGAGTCATTACCCGGACGAGCAGTGGGTTTTTCACAGTCTTACCGGTGCCACCCCTAATCTGATACAATACGATTAGAATCTCATTTGGGGAAGATGAGGGAGATGAAAAAAGGAAGAGCGTCCATCTCCATAACTCCTCTCTGATTATCATTGTATTAATTCTACAGCGGTTAGTTGTACGAAAGACTTGATTGAGGCCTTTTGATAGAGGCTAGTTCAGCACAGGGCCGGGAAGATAATGGATAATCAGTCTCTATTTGTCCTGTACATTACATGCAGTCTTACTCATTCAGAACGCTCACCACGCTTTTTAGAAACTTTGTGAAGCTAATGCAACAAAGTGGGCATAGAAGCTGCGGCGGTCTTTGTATACCGATGAGAA

Function

NR:

description
protein Dok-7-like isoform X2

GO: NA

KEGG:

id description
K24038 DOK7; docking protein 7

RNA

RNA id representative length rna type GC content exon number start site end site
XR_002470143.2 False 2599 mRNA 0.54 10 50734723 50759405
XM_021578150.2 False 2418 mRNA 0.56 13 50734724 50765893
XM_021578151.2 True 3697 mRNA 0.51 12 50734726 50767433

Neighbor

gene id symbol gene type direction distance location
LOC110500661 hgfa coding upstream 1750 50711496 ~ 50732973 (+)
LOC110500660 LOC106608656 coding upstream 27144 50629412 ~ 50707579 (+)
msantd1 LOC106608655 coding upstream 110689 50621283 ~ 50624034 (+)
LOC110500883 LOC106577571 coding upstream 119443 50598799 ~ 50615280 (+)
trnaa-cgc-5 NA coding upstream 136109 50598543 ~ 50598614 (+)
LOC110500663 LOC106608696 coding downstream 74976 50842409 ~ 50844632 (+)
LOC110500664 LOC106608659 coding downstream 135353 50902786 ~ 50905298 (+)
LOC110500665 LOC106608660 coding downstream 139047 50906480 ~ 50909607 (+)
LOC110500669 LOC106608664 coding downstream 285953 51053386 ~ 51067912 (+)
LOC110500672 NA coding downstream 332567 51100000 ~ 51101654 (+)
G1748728 NA non-coding upstream 23528 50710930 ~ 50711195 (+)
G1748706 NA non-coding upstream 113706 50620786 ~ 50621017 (+)
G1748704 NA non-coding upstream 115949 50618286 ~ 50618774 (+)
G1748703 NA non-coding upstream 117067 50617427 ~ 50617656 (+)
LOC110500658 LOC106608695 non-coding upstream 138183 50592046 ~ 50598188 (+)
G1748735 NA non-coding downstream 2289 50769722 ~ 50770727 (+)
G1749267 NA non-coding downstream 8942 50776375 ~ 50776590 (+)
G1749270 NA non-coding downstream 58379 50825812 ~ 50912133 (+)
G1749434 LOC106608661 non-coding downstream 214815 50982248 ~ 50986719 (+)
G1749436 LOC106608661 non-coding downstream 223309 50990742 ~ 50993138 (+)
LOC110500625 cj011 other upstream 1125143 49606099 ~ 49609714 (+)
G1747814 LOC106606817 other upstream 1288097 49445839 ~ 49446626 (+)
G1747255 NA other upstream 1756965 48977326 ~ 48977758 (+)
G1746471 LOC106608612 other upstream 2370797 48325100 ~ 48363926 (+)
LOC110500674 dulda other downstream 349012 51116362 ~ 51133346 (+)
gbrap gbrap other downstream 366656 51134089 ~ 51142008 (+)
G1749651 NA other downstream 595253 51362686 ~ 51363380 (+)
G1749650 NA other downstream 651536 51418969 ~ 51450475 (+)
G1750012 NA other downstream 1304167 52071600 ~ 52079002 (+)

Expression


Co-expression Network